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  5. Solyc11g069350.2.1

Solyc11g069350.2.1 (Solyc11g069350)


Aliases : Solyc11g069350

Description : RING-v-class E3 ligase


Gene families : OG0000484 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000484_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g069350.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00253970 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AMTR_s00029p00182780 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AT2G37950 No alias RING/FYVE/PHD zinc finger superfamily protein 0.01 OrthoFinder output from all 47 species
Als_g33633 No alias E3 ubiquitin ligase & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g05736 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene69359.t1 Aspi01Gene69359 E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68167 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G036800.1 Ceric.06G036800 not classified & original description: pacid=50620077... 0.04 OrthoFinder output from all 47 species
Dac_g14801 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g12552 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g08355 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g10273 No alias E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01025673001 No alias Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
LOC_Os02g06920.2 LOC_Os02g06920 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species
LOC_Os04g01490.1 LOC_Os04g01490 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
LOC_Os06g46366.1 LOC_Os06g46366 RING-v-class E3 ligase 0.03 OrthoFinder output from all 47 species
Len_g27849 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
MA_88112g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g11364 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g14219 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g25036 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g26175 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g31283 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g06087 No alias E3 ubiquitin ligase & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12741 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0028.g009961 No alias E3 ubiquitin ligase & original description: CDS=391-1818 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0096.g019306 No alias E3 ubiquitin ligase & original description: CDS=24-614 0.04 OrthoFinder output from all 47 species
Sam_g50084 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g42112 No alias E3 ubiquiTin ligase & original description: none 0.01 OrthoFinder output from all 47 species
Zm00001e031805_P001 Zm00001e031805 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e040499_P001 Zm00001e040499 RING-v-class E3 ligase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016627 oxidoreductase activity, acting on the CH-CH group of donors IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0046906 tetrapyrrole binding IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011016 Znf_RING-CH 273 320
No external refs found!