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  5. Solyc11g069710.2.1

Solyc11g069710.2.1 (Solyc11g069710)


Aliases : Solyc11g069710

Description : subfamily ABCG transporter


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g069710.2.1
Cluster HCCA: Cluster_86

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00119650 evm_27.TU.AmTr_v1... Solute transport.primary active transport.ABC... 0.04 OrthoFinder output from all 47 species
Ala_g24453 ATWBC11, ABCG11,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g02591 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06000 ATWBC11, ABCG11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g12763 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g06733 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g29827 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20148.t1 ATWBC11, ABCG11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene36347.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene65902.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04915 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01031516001 No alias Solute transport.primary active transport.ABC... 0.03 OrthoFinder output from all 47 species
LOC_Os03g64200.1 LOC_Os03g64200 subfamily ABCG transporter 0.03 OrthoFinder output from all 47 species
Len_g41025 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Mp8g12130.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Msp_g14599 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g10585 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17205 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e006437_P002 Zm00001e006437 subfamily ABCG transporter 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
MF GO:0016887 ATP hydrolysis activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0098519 obsolete nucleotide phosphatase activity, acting on free nucleotides IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR003439 ABC_transporter-like_ATP-bd 135 275
IPR013525 ABC_2_trans 435 645
No external refs found!