1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc11g071550.2.1

Solyc11g071550.2.1 (Solyc11g071550)


Aliases : Solyc11g071550

Description : Probable amidase At4g34880 OS=Arabidopsis thaliana (sp|a0a1p8b760|ami4g_arath : 499.0)


Gene families : OG0004248 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004248_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g071550.2.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00208990 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00213600 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
AMTR_s00041p00216070 evm_27.TU.AmTr_v1... Probable amidase At4g34880 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g36550 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_24946 No alias Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
LOC_Os04g10410.1 LOC_Os04g10410 Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os04g10460.1 LOC_Os04g10460 Probable amidase At4g34880 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0008171 O-methyltransferase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
InterPro domains Description Start Stop
IPR023631 Amidase_dom 50 442
No external refs found!