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  5. Solyc11g072600.3.1

Solyc11g072600.3.1 (RAP2.7, TOE1, Solyc11g072600)


Aliases : RAP2.7, TOE1, Solyc11g072600

Description : transcription factor (AP2)


Gene families : OG0000110 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000110_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g072600.3.1
Cluster HCCA: Cluster_41

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00086450 ADAP,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00019p00225230 AIL5, EMK, CHO1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AMTR_s00058p00216470 RAP2.7, TOE1,... RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
AT5G17430 BBM Integrase-type DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
Adi_g074051 ADAP AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Adi_g088509 WRI1, ATWRI1, ASML1, WRI AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Aev_g36629 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Ala_g04901 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ala_g28572 BBM not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47612 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aob_g20859 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.04 OrthoFinder output from all 47 species
Aob_g27594 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aop_g06262 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene03089.t1 WRI1, ATWRI1,... AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene21780.t1 BBM, Aspi01Gene21780 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.12G002600.1 Ceric.12G002600 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Ceric.31G036600.1 Ceric.31G036600 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Dac_g06510 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Dde_g30317 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Dde_g42409 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Ehy_g06863 AP2, FLO2, FL1 AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01016352001 RAP2.7, TOE1 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.05 OrthoFinder output from all 47 species
GSVIVT01016764001 No alias RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
GSVIVT01025307001 PLT2 RNA biosynthesis.transcriptional activation.AP2/ERF... 0.03 OrthoFinder output from all 47 species
Gb_00766 AP2, FLO2, FL1 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Gb_05487 DRG, CKC, CKC1, ANT transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Gb_11937 WRI1, ATWRI1, ASML1, WRI transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Gb_18139 No alias transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Gb_39931 WRI1, ATWRI1, ASML1, WRI transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Gb_41702 ADAP transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
LOC_Os06g05340.1 LOC_Os06g05340 transcription factor (AP2). RAM1-dependent transcription... 0.04 OrthoFinder output from all 47 species
LOC_Os06g43220.1 AP2, FLO2, FL1,... transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
LOC_Os07g39110.2 LOC_Os07g39110 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os11g03540.1 WRI1, ATWRI1,... transcription factor (AP2) 0.02 OrthoFinder output from all 47 species
Len_g45546 WRI1, ATWRI1, ASML1, WRI AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
MA_10005612g0010 ADAP no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_30905g0010 WRI1, ATWRI1, ASML1, WRI transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
MA_86195g0010 PLT2 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
MA_95471g0010 No alias transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Msp_g28024 BBM AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Nbi_g28976 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Ore_g37584 WRI1, ATWRI1, ASML1, WRI AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Pir_g37453 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Pnu_g21617 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Pp3c12_15970V3.1 Rap2.6L, Pp3c12_15970 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Pp3c12_16100V3.1 Rap2.6L, Pp3c12_16100 Integrase-type DNA-binding superfamily protein 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0100.g019681 AP2, FLO2, FL1 not classified & original description: CDS=1-681 0.03 OrthoFinder output from all 47 species
Sam_g09902 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g13728 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Sam_g37210 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Solyc09g007260.4.1 RAP2.7, TOE1,... transcription factor (AP2) 0.05 OrthoFinder output from all 47 species
Solyc11g061750.2.1 PLT2, Solyc11g061750 transcription factor (AP2) 0.03 OrthoFinder output from all 47 species
Spa_g28499 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g38473 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Spa_g38474 PLT2 AP2-type transcription factor *(WRI/AIL) & original... 0.02 OrthoFinder output from all 47 species
Tin_g40561 No alias AP2-type transcription factor *(WRI/AIL) & original... 0.03 OrthoFinder output from all 47 species
Zm00001e006752_P001 AP2, FLO2, FL1,... transcription factor (AP2) 0.05 OrthoFinder output from all 47 species
Zm00001e011539_P001 DRG, CKC, CKC1,... transcription factor (AP2) 0.05 OrthoFinder output from all 47 species
Zm00001e037501_P005 AP2, FLO2, FL1,... transcription factor (AP2) 0.04 OrthoFinder output from all 47 species
Zm00001e038652_P002 DRG, CKC, CKC1,... transcription factor (AP2) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004518 nuclease activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 159 208
No external refs found!