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  5. Solyc11g072830.1.1

Solyc11g072830.1.1 (Solyc11g072830)


Aliases : Solyc11g072830

Description : no description available(sp|q7m443|chit2_tulsb : 343.0)


Gene families : OG0000380 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc11g072830.1.1
Cluster HCCA: Cluster_36

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00023p00192080 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.03 OrthoFinder output from all 47 species
AMTR_s00023p00192280 evm_27.TU.AmTr_v1... Chitinase 1 OS=Tulipa bakeri 0.04 OrthoFinder output from all 47 species
AMTR_s00071p00062800 evm_27.TU.AmTr_v1... Chitinase 2 OS=Tulipa bakeri 0.1 OrthoFinder output from all 47 species
Adi_g049053 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g049054 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g082491 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g13931 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Als_g44113 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g44545 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g04049 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g12205 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38143 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.1Z210700.1 Ceric.1Z210700 2S globulin seed storage protein & original description:... 0.1 OrthoFinder output from all 47 species
Len_g06424 No alias 2S globulin seed storage protein & original description: none 0.06 OrthoFinder output from all 47 species
Len_g45830 No alias 2S globulin seed storage protein & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g36234 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g41812 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g06939 No alias 2S globulin seed storage protein & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g32653 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g08212 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc11g072760.1.1 Solyc11g072760 no description available(sp|q7m443|chit2_tulsb : 364.0) 0.03 OrthoFinder output from all 47 species
Spa_g41882 No alias 2S globulin seed storage protein & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0005975 carbohydrate metabolic process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
InterPro domains Description Start Stop
IPR001223 Glyco_hydro18_cat 58 222
No external refs found!