Solyc11g150146.1.1 (Solyc11g150146)

Aliases : Solyc11g150146

Description : aminoacyl-tRNA binding factor (eEF1A)

Gene families : OG0000296 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000296_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc11g150146.1.1
Cluster	HCCA: Cluster_96

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00059p00216110	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation elongation.eEF1A...	0.05	OrthoFinder output from all 47 species
AMTR_s00066p00072310	evm_27.TU.AmTr_v1...	Protein biosynthesis.translation elongation.eEF1A...	0.11	OrthoFinder output from all 47 species
AT1G07920	No alias	GTP binding Elongation factor Tu family protein	0.29	OrthoFinder output from all 47 species
AT1G07930	No alias	GTP binding Elongation factor Tu family protein	0.25	OrthoFinder output from all 47 species
AT1G07940	No alias	GTP binding Elongation factor Tu family protein	0.32	OrthoFinder output from all 47 species
AT5G60390	No alias	GTP binding Elongation factor Tu family protein	0.13	OrthoFinder output from all 47 species
Aev_g06624	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
Ala_g10935	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Als_g11645	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
Als_g26660	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
Aob_g07256	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
Aop_g09508	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.05	OrthoFinder output from all 47 species
Aop_g20702	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
Cba_g03670	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ceric.09G081400.1	Ceric.09G081400	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.13	OrthoFinder output from all 47 species
Ceric.11G084400.1	Ceric.11G084400	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.09	OrthoFinder output from all 47 species
Ceric.31G073700.1	Ceric.31G073700	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.08	OrthoFinder output from all 47 species
Dac_g22627	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
Dac_g40329	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
Dcu_g09531	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
Dcu_g10803	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.05	OrthoFinder output from all 47 species
LOC_Os03g08010.1	LOC_Os03g08010	aminoacyl-tRNA binding factor (eEF1A)	0.06	OrthoFinder output from all 47 species
LOC_Os03g08020.1	LOC_Os03g08020	aminoacyl-tRNA binding factor (eEF1A)	0.04	OrthoFinder output from all 47 species
LOC_Os03g08050.1	LOC_Os03g08050	aminoacyl-tRNA binding factor (eEF1A)	0.04	OrthoFinder output from all 47 species
Lfl_g07312	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Lfl_g07746	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
Lfl_g17369	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Lfl_g22816	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
MA_505653g0010	No alias	Elongation factor 1-alpha OS=Triticum aestivum...	0.03	OrthoFinder output from all 47 species
Mp3g23400.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.1	OrthoFinder output from all 47 species
Mp6g17700.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.04	OrthoFinder output from all 47 species
Mp6g17720.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.02	OrthoFinder output from all 47 species
Mp6g18130.1	No alias	aminoacyl-tRNA binding factor (eEF1A)	0.05	OrthoFinder output from all 47 species
Msp_g06541	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Msp_g06564	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
Msp_g29578	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Nbi_g06194	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
Ore_g12703	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
Ore_g45064	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
Pnu_g12882	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
Pp3c2_6690V3.1	Pp3c2_6690	GTP binding Elongation factor Tu family protein	0.02	OrthoFinder output from all 47 species
Pp3c2_6770V3.1	Pp3c2_6770	GTP binding Elongation factor Tu family protein	0.04	OrthoFinder output from all 47 species
Sam_g08467	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.02	OrthoFinder output from all 47 species
Sam_g16999	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.06	OrthoFinder output from all 47 species
Sam_g28089	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Sam_g29350	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.06	OrthoFinder output from all 47 species
Smo169717	No alias	Protein biosynthesis.translation elongation.eEF1A...	0.04	OrthoFinder output from all 47 species
Smo270693	No alias	Protein biosynthesis.translation elongation.eEF1A...	0.02	OrthoFinder output from all 47 species
Spa_g08926	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.07	OrthoFinder output from all 47 species
Spa_g24424	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
Spa_g24425	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.07	OrthoFinder output from all 47 species
Spa_g24426	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Spa_g50271	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.03	OrthoFinder output from all 47 species
Spa_g50273	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
Tin_g11762	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.04	OrthoFinder output from all 47 species
Tin_g11763	No alias	aminoacyl-tRNA binding factor *(eEF1A)) & original...	0.07	OrthoFinder output from all 47 species
Zm00001e026762_P001	Zm00001e026762	aminoacyl-tRNA binding factor (eEF1A)	0.12	OrthoFinder output from all 47 species
Zm00001e026763_P003	Zm00001e026763	aminoacyl-tRNA binding factor (eEF1A)	0.14	OrthoFinder output from all 47 species
Zm00001e030598_P002	Zm00001e030598	aminoacyl-tRNA binding factor (eEF1A)	0.03	OrthoFinder output from all 47 species
Zm00001e031390_P004	Zm00001e031390	aminoacyl-tRNA binding factor (eEF1A)	0.08	OrthoFinder output from all 47 species
Zm00001e031391_P002	Zm00001e031391	aminoacyl-tRNA binding factor (eEF1A)	0.07	OrthoFinder output from all 47 species
Zm00001e031407_P001	Zm00001e031407	aminoacyl-tRNA binding factor (eEF1A)	0.11	OrthoFinder output from all 47 species
Zm00001e037355_P001	Zm00001e037355	aminoacyl-tRNA binding factor (eEF1A)	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
CC	GO:0000275	mitochondrial proton-transporting ATP synthase complex, catalytic sector F(1)	IEP	HCCA
MF	GO:0003746	translation elongation factor activity	IEP	HCCA
BP	GO:0006163	purine nucleotide metabolic process	IEP	HCCA
BP	GO:0006164	purine nucleotide biosynthetic process	IEP	HCCA
BP	GO:0006414	translational elongation	IEP	HCCA
BP	GO:0006753	nucleoside phosphate metabolic process	IEP	HCCA
BP	GO:0006754	ATP biosynthetic process	IEP	HCCA
MF	GO:0008135	translation factor activity, RNA binding	IEP	HCCA
BP	GO:0009058	biosynthetic process	IEP	HCCA
BP	GO:0009059	macromolecule biosynthetic process	IEP	HCCA
BP	GO:0009117	nucleotide metabolic process	IEP	HCCA
BP	GO:0009141	nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009142	nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009144	purine nucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009145	purine nucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009150	purine ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009152	purine ribonucleotide biosynthetic process	IEP	HCCA
BP	GO:0009165	nucleotide biosynthetic process	IEP	HCCA
BP	GO:0009199	ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009201	ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009205	purine ribonucleoside triphosphate metabolic process	IEP	HCCA
BP	GO:0009206	purine ribonucleoside triphosphate biosynthetic process	IEP	HCCA
BP	GO:0009259	ribonucleotide metabolic process	IEP	HCCA
BP	GO:0009260	ribonucleotide biosynthetic process	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
BP	GO:0019693	ribose phosphate metabolic process	IEP	HCCA
CC	GO:0033178	proton-transporting two-sector ATPase complex, catalytic domain	IEP	HCCA
BP	GO:0034220	monoatomic ion transmembrane transport	IEP	HCCA
BP	GO:0034641	cellular nitrogen compound metabolic process	IEP	HCCA
BP	GO:0034645	cellular macromolecule biosynthetic process	IEP	HCCA
BP	GO:0044237	cellular metabolic process	IEP	HCCA
BP	GO:0044249	cellular biosynthetic process	IEP	HCCA
BP	GO:0044260	cellular macromolecule metabolic process	IEP	HCCA
BP	GO:0044271	cellular nitrogen compound biosynthetic process	IEP	HCCA
MF	GO:0045182	translation regulator activity	IEP	HCCA
CC	GO:0045261	proton-transporting ATP synthase complex, catalytic core F(1)	IEP	HCCA
BP	GO:0046034	ATP metabolic process	IEP	HCCA
BP	GO:0046390	ribose phosphate biosynthetic process	IEP	HCCA
BP	GO:0055086	nucleobase-containing small molecule metabolic process	IEP	HCCA
BP	GO:0072521	purine-containing compound metabolic process	IEP	HCCA
BP	GO:0072522	purine-containing compound biosynthetic process	IEP	HCCA
MF	GO:0090079	translation regulator activity, nucleic acid binding	IEP	HCCA
BP	GO:0090407	organophosphate biosynthetic process	IEP	HCCA
BP	GO:0098655	monoatomic cation transmembrane transport	IEP	HCCA
BP	GO:0098660	inorganic ion transmembrane transport	IEP	HCCA
BP	GO:0098662	inorganic cation transmembrane transport	IEP	HCCA
CC	GO:0098798	mitochondrial protein-containing complex	IEP	HCCA
CC	GO:0098800	inner mitochondrial membrane protein complex	IEP	HCCA
BP	GO:1901137	carbohydrate derivative biosynthetic process	IEP	HCCA
BP	GO:1901293	nucleoside phosphate biosynthetic process	IEP	HCCA
BP	GO:1901566	organonitrogen compound biosynthetic process	IEP	HCCA
BP	GO:1901576	organic substance biosynthetic process	IEP	HCCA
BP	GO:1902600	proton transmembrane transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000795	T_Tr_GTP-bd_dom	7	83
IPR000795	T_Tr_GTP-bd_dom	89	260
IPR004160	Transl_elong_EFTu/EF1A_C	360	467
IPR004161	EFTu-like_2	286	351

External Links

No external refs found!

Solyc11g150146.1.1 (Solyc11g150146)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation