Solyc12g007070.2.1 (AT-HSFC1, HSFC1,...)

Aliases : AT-HSFC1, HSFC1, Solyc12g007070

Description : transcription factor (HSF)

Gene families : OG0000093 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000093_tree

Sequence : coding (download), protein (download)

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g007070.2.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00036p00115830	AT-HSFA6B,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
AMTR_s00048p00075850	HSFA1B, ATHSF3,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.01	OrthoFinder output from all 47 species
AMTR_s00069p00068180	AT-HSFB2A,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.01	OrthoFinder output from all 47 species
AT2G41690	AT-HSFB3, HSFB3	heat shock transcription factor B3	0.06	OrthoFinder output from all 47 species
AT3G22830	AT-HSFA6B, HSFA6B	heat shock transcription factor A6B	0.04	OrthoFinder output from all 47 species
AT4G11660	AT-HSFB2B, HSFB2B	winged-helix DNA-binding transcription factor family protein	0.01	OrthoFinder output from all 47 species
AT5G03720	HSFA3, AT-HSFA3	heat shock transcription factor A3	0.02	OrthoFinder output from all 47 species
Adi_g085654	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aev_g41017	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g07805	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Als_g37067	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene03227.t1	HSFB4, SCZ,...	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Aspi01Gene65605.t1	HSFA1B, ATHSF3,...	transcriptional regulator *(HsfA1) & original description: none	0.02	OrthoFinder output from all 47 species
Aspi01Gene69372.t1	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
Azfi_s0011.g012606	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: CDS=1-1191	0.01	OrthoFinder output from all 47 species
Azfi_s0672.g081792	HSF4, HSFB1,...	HSF-type transcription factor & original description: CDS=1-651	0.02	OrthoFinder output from all 47 species
Cba_g06389	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Ceric.09G066500.1	HSFB4, SCZ,...	HSF-type transcription factor & original description:...	0.05	OrthoFinder output from all 47 species
Ceric.16G045800.1	ATHSF1, HSF1,...	transcriptional regulator *(HsfA1) & original...	0.03	OrthoFinder output from all 47 species
Ceric.20G059100.1	ATHSF1, HSF1,...	transcriptional regulator *(HsfA1) & original...	0.02	OrthoFinder output from all 47 species
Ceric.29G078200.1	HSFB4, SCZ,...	HSF-type transcription factor & original description:...	0.01	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00000057.99	HSFA1B, ATHSF3,...	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
Dde_g43825	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.03	OrthoFinder output from all 47 species
GSVIVT01002066001	AT-HSFB2A, HSFB2A	RNA biosynthesis.transcriptional activation.HSF (heat...	0.02	OrthoFinder output from all 47 species
GSVIVT01015389001	AT-HSFC1, HSFC1	RNA biosynthesis.transcriptional activation.HSF (heat...	0.11	OrthoFinder output from all 47 species
GSVIVT01021269001	HSF A4A, AT-HSFA4A	RNA biosynthesis.transcriptional activation.HSF (heat...	0.03	OrthoFinder output from all 47 species
GSVIVT01033257001	AT-HSFB3, HSFB3	RNA biosynthesis.transcriptional activation.HSF (heat...	0.01	OrthoFinder output from all 47 species
LOC_Os06g22610.1	AT-HSFA7A,...	Heat stress transcription factor A-2a OS=Oryza sativa...	0.2	OrthoFinder output from all 47 species
LOC_Os08g43334.1	AT-HSFB2A,...	transcription factor (HSF)	0.01	OrthoFinder output from all 47 species
LOC_Os09g28200.1	HSFB4, SCZ,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
LOC_Os09g28354.1	HSF4, HSFB1,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Lfl_g26028	ATHSF1, HSF1,...	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
MA_113508g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
MA_13910g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
MA_8812600g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.01	OrthoFinder output from all 47 species
MA_8845456g0010	HSFB4, SCZ, AT-HSFB4	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Nbi_g03550	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g06083	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g09931	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g20199	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.01	OrthoFinder output from all 47 species
Pnu_g21944	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g30272	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g57933	AT-HSFA6B, HSFA6B	HSF-type transcription factor & original description: none	0.02	OrthoFinder output from all 47 species
Sacu_v1.1_s0042.g012750	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: CDS=1-2229	0.01	OrthoFinder output from all 47 species
Sacu_v1.1_s0118.g021246	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: CDS=1-1665	0.02	OrthoFinder output from all 47 species
Solyc02g072000.3.1	HSF A4A,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species
Solyc10g079380.2.1	AT-HSFB3, HSFB3,...	transcription factor (HSF)	0.04	OrthoFinder output from all 47 species
Solyc12g098520.2.1	AT-HSFA5, HSFA5,...	transcription factor (HSF)	0.02	OrthoFinder output from all 47 species
Spa_g28879	HSFB4, SCZ, AT-HSFB4	HSF-type transcription factor & original description: none	0.08	OrthoFinder output from all 47 species
Zm00001e014583_P001	AT-HSFA5, HSFA5,...	transcription factor (HSF)	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	Interproscan
MF	GO:0005488	binding	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0006355	regulation of DNA-templated transcription	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
CC	GO:0018995	host cellular component	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
CC	GO:0033643	host cell part	None	Extended
CC	GO:0033646	host intracellular part	None	Extended
CC	GO:0033647	host intracellular organelle	None	Extended
CC	GO:0033648	host intracellular membrane-bounded organelle	None	Extended
CC	GO:0042025	host cell nucleus	IEA	Interproscan
MF	GO:0043565	sequence-specific DNA binding	IEA	Interproscan
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
BP	GO:0005975	carbohydrate metabolic process	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR000232	HSF_DNA-bd	10	99

External Links

No external refs found!

Solyc12g007070.2.1 (AT-HSFC1, HSFC1,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation