Solyc12g013640.2.1 (Solyc12g013640)

Aliases : Solyc12g013640

Description : subfamily ABCG transporter

Gene families : OG0000438 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000438_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g013640.2.1

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00011p00258490	ABCG14,...	Solute transport.primary active transport.ABC...	0.02	OrthoFinder output from all 47 species
AMTR_s00057p00214480	evm_27.TU.AmTr_v1...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
AMTR_s00134p00069640	ABCG25,...	Solute transport.primary active transport.ABC...	0.01	OrthoFinder output from all 47 species
AT1G31770	ABCG14	ATP-binding cassette 14	0.03	OrthoFinder output from all 47 species
Aspi01Gene12549.t2	Aspi01Gene12549	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0073.g037209	No alias	subfamily ABCG transporter & original description: CDS=211-2310	0.02	OrthoFinder output from all 47 species
Ceric.13G057300.1	ABCG26, WBC27,...	subfamily ABCG transporter & original description:...	0.01	OrthoFinder output from all 47 species
Ceric.30G014400.1	Ceric.30G014400	subfamily ABCG transporter & original description:...	0.01	OrthoFinder output from all 47 species
Dac_g07574	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g12680	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g13413	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Dcu_g19285	No alias	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Dcu_g20374	No alias	sporopollenin precursor exporter *(ABCG26) & original...	0.03	OrthoFinder output from all 47 species
Dcu_g34069	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Dde_g21850	No alias	subfamily ABCG transporter & original description: none	0.05	OrthoFinder output from all 47 species
Dde_g47725	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Len_g07347	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Len_g10281	No alias	subfamily ABCG transporter & original description: none	0.03	OrthoFinder output from all 47 species
Len_g37001	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
MA_81274g0010	ABCG14	subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Mp6g05900.1	ABCG14	subfamily ABCG transporter	0.02	OrthoFinder output from all 47 species
Msp_g10212	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Nbi_g10128	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Pir_g15519	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g03210	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Solyc04g006960.3.1	Solyc04g006960	cytokinin transporter (ABCG14). subfamily ABCG transporter	0.03	OrthoFinder output from all 47 species
Solyc07g065780.2.1	ABCG26, WBC27,...	ABC transporter G family member 26 OS=Arabidopsis...	0.01	OrthoFinder output from all 47 species
Spa_g05719	ABCG26, WBC27	subfamily ABCG transporter & original description: none	0.01	OrthoFinder output from all 47 species
Spa_g06146	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g26315	No alias	subfamily ABCG transporter & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0016887	ATP hydrolysis activity	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like_ATP-bd	63	214
IPR013525	ABC_2_trans	366	570

External Links

No external refs found!

Solyc12g013640.2.1 (Solyc12g013640)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation