Solyc12g013920.2.1 (Solyc12g013920)


Aliases : Solyc12g013920

Description : Protein yippee-like At5g53940 OS=Arabidopsis thaliana (sp|q9fn32|yipl7_arath : 207.0)


Gene families : OG0000369 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000369_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g013920.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00110880 evm_27.TU.AmTr_v1... Protein yippee-like At4g27745 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Adi_g087353 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46212 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene12522.t1 Aspi01Gene12522 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g12147 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g30512 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.02G060500.1 Ceric.02G060500 ethylene signal transducer *(EIN3/EIL) & original... 0.03 OrthoFinder output from all 47 species
Ceric.38G056100.1 Ceric.38G056100 not classified & original description: pacid=50579589... 0.03 OrthoFinder output from all 47 species
Ehy_g13586 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019631001 No alias Protein yippee-like At4g27745 OS=Arabidopsis thaliana 0.05 OrthoFinder output from all 47 species
Lfl_g05904 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g30441 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Mp4g11690.1 No alias Protein yippee-like At5g53940 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g26779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00285 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g11205 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g03261 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02750 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0006325 chromatin organization IEP HCCA
BP GO:0006334 nucleosome assembly IEP HCCA
BP GO:0006338 chromatin remodeling IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030118 clathrin coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030125 clathrin vesicle coat IEP HCCA
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP HCCA
CC GO:0030132 clathrin coat of coated pit IEP HCCA
BP GO:0034728 nucleosome organization IEP HCCA
BP GO:0043933 protein-containing complex organization IEP HCCA
BP GO:0065003 protein-containing complex assembly IEP HCCA
BP GO:0065004 protein-DNA complex assembly IEP HCCA
BP GO:0071824 protein-DNA complex subunit organization IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
InterPro domains Description Start Stop
IPR004910 Yippee/Mis18/Cereblon 13 105
No external refs found!