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  5. Solyc12g014550.1.1

Solyc12g014550.1.1 (ATSYP52, SYP52, Solyc12g014550)


Aliases : ATSYP52, SYP52, Solyc12g014550

Description : SYP5 group Qc-type SNARE protein


Gene families : OG0001545 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001545_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g014550.1.1

Target Alias Description ECC score Gene Family Method Actions
Len_g29175 ATSYP52, SYP52 Qc-type SYP5-group component of SNARE membrane fusion... 0.02 OrthoFinder output from all 47 species
Mp3g14430.1 ATSYP52, SYP52 SYP5 group Qc-type SNARE protein 0.03 OrthoFinder output from all 47 species
Smo441012 ATSYP51, SYP51 Vesicle trafficking.SNARE target membrane recognition... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004866 endopeptidase inhibitor activity IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016624 oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016903 oxidoreductase activity, acting on the aldehyde or oxo group of donors IEP HCCA
MF GO:0030414 peptidase inhibitor activity IEP HCCA
MF GO:0045735 nutrient reservoir activity IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
MF GO:0061134 peptidase regulator activity IEP HCCA
MF GO:0061135 endopeptidase regulator activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!