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  5. Solyc12g014600.2.1

Solyc12g014600.2.1 (Solyc12g014600)


Aliases : Solyc12g014600

Description : Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana (sp|q8w034|rnp1_arath : 217.0)


Gene families : OG0000120 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000120_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g014600.2.1

Target Alias Description ECC score Gene Family Method Actions
Adi_g085912 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05289 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g05367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g13552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001130.27 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre07.g330300 No alias Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
LOC_Os08g23120.1 LOC_Os08g23120 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Len_g02314 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g21023 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g33245 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g05225 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g56140 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10981 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e010648_P001 Zm00001e010648 Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 109 168
IPR000504 RRM_dom 9 75
No external refs found!