1. Home
  2. Species
  3. Solanum lycopersicum
  4. Sequence
  5. Solyc12g017880.3.1

Solyc12g017880.3.1 (Solyc12g017880)


Aliases : Solyc12g017880

Description : Cytochrome b561 and DOMON domain-containing protein At3g25290 OS=Arabidopsis thaliana (sp|q9lse7|b561c_arath : 173.0)


Gene families : OG0000289 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000289_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g017880.3.1
Cluster HCCA: Cluster_30

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00011p00159800 evm_27.TU.AmTr_v1... No description available 0.04 OrthoFinder output from all 47 species
AMTR_s00020p00030660 evm_27.TU.AmTr_v1... Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
AMTR_s00021p00244700 evm_27.TU.AmTr_v1... Cytochrome b561 and DOMON domain-containing protein... 0.08 OrthoFinder output from all 47 species
AMTR_s00055p00147440 evm_27.TU.AmTr_v1... Cytochrome b561 and DOMON domain-containing protein... 0.06 OrthoFinder output from all 47 species
AMTR_s00055p00154770 evm_27.TU.AmTr_v1... Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
AT2G04850 No alias Auxin-responsive family protein 0.09 OrthoFinder output from all 47 species
AT3G07570 No alias Cytochrome b561/ferric reductase transmembrane with... 0.03 OrthoFinder output from all 47 species
AT3G61750 No alias Cytochrome b561/ferric reductase transmembrane with... 0.07 OrthoFinder output from all 47 species
AT4G17280 No alias Auxin-responsive family protein 0.04 OrthoFinder output from all 47 species
AT5G35735 No alias Auxin-responsive family protein 0.03 OrthoFinder output from all 47 species
Adi_g016918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g36756 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08435 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g09008 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31917 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g38521 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03149 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g06617 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g10355 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene00033.t1 Aspi01Gene00033 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene50071.t1 Aspi01Gene50071 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58681.t1 Aspi01Gene58681 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene70146.t1 Aspi01Gene70146 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.10G059700.1 Ceric.10G059700 not classified & original description: pacid=50612710... 0.04 OrthoFinder output from all 47 species
Ceric.11G016200.1 Ceric.11G016200 not classified & original description: pacid=50595669... 0.03 OrthoFinder output from all 47 species
Dac_g00664 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g06980 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g11873 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g03353 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g09920 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g13198 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15834 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g17602 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01001902001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01006721001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.06 OrthoFinder output from all 47 species
GSVIVT01012672001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01023366001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01027122001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
GSVIVT01030035001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
GSVIVT01030038001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
GSVIVT01037693001 No alias Cytochrome b561 and DOMON domain-containing protein... 0.14 OrthoFinder output from all 47 species
Gb_13521 No alias Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Gb_13627 No alias Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Gb_13629 No alias Cytochrome b561 and DOMON domain-containing protein... 0.02 OrthoFinder output from all 47 species
Gb_20590 No alias Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os01g48850.1 LOC_Os01g48850 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os03g09850.1 LOC_Os03g09850 Cytochrome b561 and DOMON domain-containing protein... 0.08 OrthoFinder output from all 47 species
LOC_Os03g09880.1 LOC_Os03g09880 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os03g09900.1 LOC_Os03g09900 Cytochrome b561 and DOMON domain-containing protein... 0.05 OrthoFinder output from all 47 species
LOC_Os04g41810.1 LOC_Os04g41810 Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os05g48270.1 LOC_Os05g48270 Cytochrome b561 and DOMON domain-containing protein... 0.07 OrthoFinder output from all 47 species
LOC_Os08g24790.1 LOC_Os08g24790 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os08g41290.1 AIR12, LOC_Os08g41290 Auxin-induced in root cultures protein 12 OS=Arabidopsis... 0.07 OrthoFinder output from all 47 species
LOC_Os09g32470.1 LOC_Os09g32470 Cytochrome b561 and DOMON domain-containing protein... 0.07 OrthoFinder output from all 47 species
Len_g14931 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g17297 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g11228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_589691g0010 No alias Cytochrome b561 and DOMON domain-containing protein... 0.02 OrthoFinder output from all 47 species
MA_62189g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_7500788g0010 No alias no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g07760 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g08794 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g22186 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g14735 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g14785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22009 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g22426 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g26230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g29311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Smo101207 No alias Cytochrome b561 and DOMON domain-containing protein... 0.03 OrthoFinder output from all 47 species
Smo412554 No alias Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Smo73358 No alias Cytochrome b561 and DOMON domain-containing protein... 0.02 OrthoFinder output from all 47 species
Solyc05g041870.2.1 Solyc05g041870 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc06g082860.4.1 Solyc06g082860 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc07g048070.3.1 Solyc07g048070 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc09g056360.3.1 Solyc09g056360 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc11g012420.2.1 Solyc11g012420 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Tin_g01759 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g04545 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09268 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e000803_P001 Zm00001e000803 Cytochrome b561 and DOMON domain-containing protein... 0.08 OrthoFinder output from all 47 species
Zm00001e003620_P001 AIR12, Zm00001e003620 Auxin-induced in root cultures protein 12 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e010141_P001 Zm00001e010141 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e020158_P001 Zm00001e020158 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species
Zm00001e026478_P001 Zm00001e026478 Cytochrome b561 and DOMON domain-containing protein... 0.06 OrthoFinder output from all 47 species
Zm00001e034602_P002 Zm00001e034602 Cytochrome b561 and DOMON domain-containing protein... 0.06 OrthoFinder output from all 47 species
Zm00001e034603_P001 Zm00001e034603 Cytochrome b561 and DOMON domain-containing protein... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
CC GO:0048046 apoplast IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
InterPro domains Description Start Stop
IPR005018 DOMON_domain 93 202
No external refs found!