Solyc12g019550.2.1 (Solyc12g019550)


Aliases : Solyc12g019550

Description : no hits & (original description: none)


Gene families : OG0008222 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008222_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g019550.2.1
Cluster HCCA: Cluster_140

Target Alias Description ECC score Gene Family Method Actions
Adi_g002273 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Ala_g31294 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g32224 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g11861 No alias not classified & original description: none 0.11 OrthoFinder output from all 47 species
Azfi_s0008.g011475 No alias not classified & original description: CDS=1-573 0.06 OrthoFinder output from all 47 species
Ceric.34G020300.1 Ceric.34G020300 not classified & original description: pacid=50622640... 0.1 OrthoFinder output from all 47 species
Dcu_g14191 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ehy_g06465 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
GSVIVT01038189001 No alias No description available 0.08 OrthoFinder output from all 47 species
LOC_Os09g34140.2 LOC_Os09g34140 no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
Len_g02582 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g07262 No alias not classified & original description: none 0.18 OrthoFinder output from all 47 species
MA_10434413g0010 No alias no hits & (original description: none) 0.1 OrthoFinder output from all 47 species
Msp_g08977 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g06460 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Sam_g14970 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Tin_g17065 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Zm00001e034712_P001 Zm00001e034712 no hits & (original description: none) 0.2 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0005575 cellular_component IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
CC GO:0009507 chloroplast IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009536 plastid IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
CC GO:0016020 membrane IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
CC GO:0098796 membrane protein complex IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA

No InterPro domains available for this sequence

No external refs found!