Solyc12g035990.1.1 (YCF2.1, Solyc12g035990)

Aliases : YCF2.1, Solyc12g035990

Description : Protein Ycf2 OS=Solanum bulbocastanum (sp|q2mic5|ycf2_solbu : 156.0)

Gene families : OG0003470 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003470_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g035990.1.1

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01029119001	YCF2.1	Protein Ycf2 OS=Vitis vinifera	0.03	OrthoFinder output from all 47 species
Solyc01g017130.1.1	YCF2.1, Solyc01g017130	Protein Ycf2 OS=Solanum tuberosum (sp\|q27ry7\|ycf2_soltu : 147.0)	0.06	OrthoFinder output from all 47 species
Solyc01g017280.1.1	YCF2.1, Solyc01g017280	Protein Ycf2 OS=Solanum lycopersicum...	0.09	OrthoFinder output from all 47 species
Solyc02g014780.1.1	YCF2.1, Solyc02g014780	Protein Ycf2 OS=Nicotiana tabacum (sp\|p09976\|ycf2_tobac : 133.0)	0.2	OrthoFinder output from all 47 species
Solyc03g020090.1.1	YCF2.1, Solyc03g020090	Protein Ycf2 OS=Daucus carota (sp\|q0g9q1\|ycf2_dauca : 187.0)	0.04	OrthoFinder output from all 47 species
Solyc03g058250.1.1	YCF2.1, Solyc03g058250	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc08g029410.1.1	YCF2.1, Solyc08g029410	Protein Ycf2 OS=Solanum lycopersicum...	0.08	OrthoFinder output from all 47 species
Solyc09g031850.1.1	YCF2.1, Solyc09g031850	Protein Ycf2 OS=Solanum tuberosum (sp\|q27ry7\|ycf2_soltu : 146.0)	0.05	OrthoFinder output from all 47 species
Solyc10g019010.1.1	YCF2.1, Solyc10g019010	Protein Ycf2 OS=Solanum tuberosum (sp\|q27ry7\|ycf2_soltu : 122.0)	0.05	OrthoFinder output from all 47 species
Solyc11g062040.1.1	YCF2.1, Solyc11g062040	Protein Ycf2 A OS=Atropa belladonna...	0.07	OrthoFinder output from all 47 species
Solyc12g035970.1.1	YCF2.1, Solyc12g035970	Protein Ycf2 OS=Solanum lycopersicum...	0.04	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0009507	chloroplast	IEA	Interproscan
CC	GO:0009536	plastid	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	HCCA
BP	GO:0006950	response to stress	IEP	HCCA
BP	GO:0006979	response to oxidative stress	IEP	HCCA
MF	GO:0016209	antioxidant activity	IEP	HCCA
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR008543	Uncharacterised_Ycf2	3	102

External Links

No external refs found!