Solyc12g036130.1.1 (ABCC12, MRP13,...)

Aliases : ABCC12, MRP13, ATMRP13, Solyc12g036130

Description : ABC transporter C family member 12 OS=Arabidopsis thaliana (sp|q9c8h0|ab12c_arath : 244.0)

Gene families : OG0000037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g036130.1.1

Target	Alias	Description	ECC score	Gene Family Method
Aev_g15090	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Aev_g33144	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Als_g26619	ATABCC5, MRP5,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Als_g30300	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Aop_g29227	AtABCC2, ABCC2,...	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Aop_g29228	AtABCC2, ABCC2,...	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Aspi01Gene66471.t1	MRP6, ATMRP6,...	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0099.g044209	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: CDS=209-3898	0.05	OrthoFinder output from all 47 species
Cba_g12503	MRP6, ATMRP6, ABCC8	subfamily ABCC transporter & original description: none	0.02	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00001254.8	MRP10, ATMRP10, ABCC14	No description available	0.01	OrthoFinder output from all 47 species
Dac_g05572	AtABCC2, ABCC2,...	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Dcu_g02029	ATABCC5, MRP5,...	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
LOC_Os01g07870.1	ABCC3, ATMRP3,...	subfamily ABCC transporter	0.04	OrthoFinder output from all 47 species
LOC_Os04g13220.1	EST3, MRP4,...	subfamily ABCC transporter	0.09	OrthoFinder output from all 47 species
Len_g16987	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g47149	MRP9, ABCC9, ATMRP9	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Msp_g48272	ATMRP12, MRP12, ABCC11	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018945	AtABCC2, ABCC2,...	not classified & original description: CDS=17-331	0.03	OrthoFinder output from all 47 species
Spa_g04417	EST3, MRP4, ATMRP4, ABCC4	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g25978	MRP10, ATMRP10, ABCC14	subfamily ABCC transporter & original description: none	0.03	OrthoFinder output from all 47 species
Spa_g54061	MRP6, ATMRP6, ABCC8	not classified & original description: none	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005215	transporter activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	Interproscan
BP	GO:0006810	transport	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0015399	primary active transmembrane transporter activity	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0022804	active transmembrane transporter activity	None	Extended
MF	GO:0022857	transmembrane transporter activity	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0042626	ATPase-coupled transmembrane transporter activity	IEA	Interproscan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0055085	transmembrane transport	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140657	ATP-dependent activity	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004180	carboxypeptidase activity	IEP	HCCA
MF	GO:0004185	serine-type carboxypeptidase activity	IEP	HCCA
MF	GO:0008236	serine-type peptidase activity	IEP	HCCA
MF	GO:0008238	exopeptidase activity	IEP	HCCA
MF	GO:0016462	pyrophosphatase activity	IEP	HCCA
MF	GO:0016787	hydrolase activity	IEP	HCCA
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	IEP	HCCA
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	IEP	HCCA
MF	GO:0016887	ATP hydrolysis activity	IEP	HCCA
MF	GO:0017111	ribonucleoside triphosphate phosphatase activity	IEP	HCCA
MF	GO:0017171	serine hydrolase activity	IEP	HCCA
MF	GO:0070008	serine-type exopeptidase activity	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR011527	ABC1_TM_dom	3	206

External Links

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Solyc12g036130.1.1 (ABCC12, MRP13,...)

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation