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  5. Solyc12g036400.1.1

Solyc12g036400.1.1 (Solyc12g036400)


Aliases : Solyc12g036400

Description : no description available(sp|q65xs5|bc10_orysj : 169.0)


Gene families : OG0000231 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000231_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g036400.1.1
Cluster HCCA: Cluster_118

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00172530 evm_27.TU.AmTr_v1... No description available 0.03 OrthoFinder output from all 47 species
AMTR_s00099p00078200 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT1G10880 No alias Core-2/I-branching... 0.04 OrthoFinder output from all 47 species
AT1G73810 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
AT2G19160 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
AT4G32290 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
AT5G14550 No alias Core-2/I-branching... 0.03 OrthoFinder output from all 47 species
AT5G25330 No alias Core-2/I-branching... 0.04 OrthoFinder output from all 47 species
Adi_g030608 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g25309 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04274 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aob_g13322 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g04348 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g04210.1 LOC_Os01g04210 no description available(sp|q65xs5|bc10_orysj : 129.0) 0.02 OrthoFinder output from all 47 species
LOC_Os01g50040.1 LOC_Os01g50040 no description available(sp|q65xs5|bc10_orysj : 323.0) 0.02 OrthoFinder output from all 47 species
LOC_Os04g20420.1 LOC_Os04g20420 no description available(sp|q65xs5|bc10_orysj : 171.0) 0.02 OrthoFinder output from all 47 species
LOC_Os04g51794.2 LOC_Os04g51794 no description available(sp|q65xs5|bc10_orysj : 176.0) 0.03 OrthoFinder output from all 47 species
LOC_Os06g45110.1 LOC_Os06g45110 no description available(sp|q65xs5|bc10_orysj : 184.0) 0.02 OrthoFinder output from all 47 species
LOC_Os08g12890.1 LOC_Os08g12890 no description available(sp|q65xs5|bc10_orysj : 172.0) 0.07 OrthoFinder output from all 47 species
Lfl_g06000 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_11883g0010 No alias no description available(sp|q65xs5|bc10_orysj : 160.0) 0.04 OrthoFinder output from all 47 species
Mp4g07380.1 No alias no description available(sp|q65xs5|bc10_orysj : 118.0) 0.02 OrthoFinder output from all 47 species
Mp8g13670.1 No alias no description available(sp|q65xs5|bc10_orysj : 104.0) 0.03 OrthoFinder output from all 47 species
Msp_g39137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g44730 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02196 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007463 No alias not classified & original description: CDS=1-1293 0.02 OrthoFinder output from all 47 species
Spa_g51357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e005574_P001 Zm00001e005574 no description available(sp|q65xs5|bc10_orysj : 162.0) 0.02 OrthoFinder output from all 47 species
Zm00001e007002_P001 Zm00001e007002 no description available(sp|q65xs5|bc10_orysj : 177.0) 0.02 OrthoFinder output from all 47 species
Zm00001e017003_P001 Zm00001e017003 no description available(sp|q65xs5|bc10_orysj : 104.0) 0.04 OrthoFinder output from all 47 species
Zm00001e019094_P001 Zm00001e019094 no description available(sp|q65xs5|bc10_orysj : 183.0) 0.03 OrthoFinder output from all 47 species
Zm00001e026725_P003 Zm00001e026725 no description available(sp|q65xs5|bc10_orysj : 579.0) 0.04 OrthoFinder output from all 47 species
Zm00001e029160_P001 Zm00001e029160 no description available(sp|q65xs5|bc10_orysj : 176.0) 0.02 OrthoFinder output from all 47 species
Zm00001e030236_P001 Zm00001e030236 no description available(sp|q65xs5|bc10_orysj : 184.0) 0.02 OrthoFinder output from all 47 species
Zm00001e040053_P001 Zm00001e040053 no description available(sp|q65xs5|bc10_orysj : 165.0) 0.08 OrthoFinder output from all 47 species
Zm00001e041599_P001 Zm00001e041599 no description available(sp|q65xs5|bc10_orysj : 166.0) 0.03 OrthoFinder output from all 47 species
Zm00001e042023_P001 Zm00001e042023 no description available(sp|q65xs5|bc10_orysj : 163.0) 0.08 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
MF GO:0005319 lipid transporter activity IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0006869 lipid transport IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0061024 membrane organization IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0120009 intermembrane lipid transfer IEP HCCA
MF GO:0120013 lipid transfer activity IEP HCCA
InterPro domains Description Start Stop
IPR003406 Glyco_trans_14 144 372
No external refs found!