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  5. Solyc12g036470.2.1

Solyc12g036470.2.1 (BEE3, Solyc12g036470)


Aliases : BEE3, Solyc12g036470

Description : transcription factor (bHLH). transcriptional regulator (CIB)


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g036470.2.1
Cluster HCCA: Cluster_113

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00265010 HEC2,... RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
AMTR_s00022p00228970 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
AMTR_s00070p00149100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00079p00137860 BEE3,... External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
AT1G09530 PIF3, POC1, PAP3 phytochrome interacting factor 3 0.04 OrthoFinder output from all 47 species
AT1G18400 BEE1 BR enhanced expression 1 0.04 OrthoFinder output from all 47 species
AT1G25330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G59640 BPEp, ZCW32, BPE, BPEub BIG PETAL P 0.06 OrthoFinder output from all 47 species
AT1G66470 RHD6 ROOT HAIR DEFECTIVE6 0.05 OrthoFinder output from all 47 species
AT1G68920 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G42280 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT2G46970 PIL1 phytochrome interacting factor 3-like 1 0.07 OrthoFinder output from all 47 species
AT3G21330 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G50330 HEC2 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT4G00120 GT140, IND1, IND, EDA33 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G28790 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G28800 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G34530 CIB1 cryptochrome-interacting basic-helix-loop-helix 1 0.04 OrthoFinder output from all 47 species
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G37800 ATRSL1, RSL1 RHD SIX-LIKE 1 0.04 OrthoFinder output from all 47 species
AT5G50915 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G58010 LRL3 LJRHL1-like 3 0.03 OrthoFinder output from all 47 species
AT5G67060 HEC1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
Adi_g056779 ATRSL1, RSL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g075291 ATRSL1, RSL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g03333 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aev_g09029 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g14326 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aev_g17417 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aev_g17433 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ala_g07904 CIB1 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ala_g10321 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26152 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ala_g26607 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g39083 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01540 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g01664 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g09007 CIB1 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Als_g09992 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Als_g28088 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g33578 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g37127 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g50421 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aob_g29567 CIB5 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aob_g30603 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g31589 RSL4 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g21701 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g26245 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g39355 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g41589 RSL2 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene24671.t1 LRL1, Aspi01Gene24671 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene35112.t2 SPT, Aspi01Gene35112 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene54622.t1 LRL3, Aspi01Gene54622 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene54623.t1 LRL3, Aspi01Gene54623 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene67543.t1 SPT, Aspi01Gene67543 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0043.g026959 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Azfi_s0054.g033854 No alias bHLH-type transcription factor & original description: CDS=1-1758 0.06 OrthoFinder output from all 47 species
Azfi_s0482.g073137 LRL3 bHLH-type transcription factor & original description: CDS=1-1173 0.04 OrthoFinder output from all 47 species
Cba_g13645 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15079 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Cba_g15803 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Cba_g25008 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.04G038900.1 LRL3, Ceric.04G038900 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.04G097400.1 HEC1, Ceric.04G097400 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z049000.1 HEC1, Ceric.1Z049000 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.1Z049100.1 HEC1, Ceric.1Z049100 bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.21G084700.1 PIF3, POC1,... bHLH-type transcription factor & original description:... 0.04 OrthoFinder output from all 47 species
Ceric.22G021400.1 CIB5, Ceric.22G021400 regulatory protein (CIB) of blue light perception &... 0.05 OrthoFinder output from all 47 species
Dac_g07111 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Dac_g09501 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g11083 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g13296 LRL3 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g32598 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g41029 RSL2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g06970 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g17764 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51679 HEC2 bHLH-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Dde_g43893 HEC1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g03657 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06624 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ehy_g19692 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01008299001 BEE3 External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
GSVIVT01009479001 HEC1 RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01018164001 UNE10 Transcription factor UNE10 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01018165001 UNE10 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01020814001 SRL2, PIF4, AtPIF4 External stimuli response.light.red/far red light.PIF... 0.03 OrthoFinder output from all 47 species
GSVIVT01025313001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
GSVIVT01026516001 HEC3 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Gb_27869 HEC1 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Gb_30839 RHD6 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Gb_36369 BPEp, ZCW32, BPE, BPEub transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g38610.1 LOC_Os01g38610 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os02g39140.1 LOC_Os02g39140 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os02g47660.1 CIB1, LOC_Os02g47660 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
LOC_Os04g41229.1 LOC_Os04g41229 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os05g46370.1 LOC_Os05g46370 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os06g06900.1 SPT, LOC_Os06g06900 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os06g08500.1 LRL3, LOC_Os06g08500 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os07g05010.2 PIL5, PIF1,... transcription factor (bHLH). PIF red/far-red light... 0.03 OrthoFinder output from all 47 species
LOC_Os08g01700.1 HEC3, LOC_Os08g01700 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os08g39630.1 LOC_Os08g39630 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os09g28210.1 HEC1, LOC_Os09g28210 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Len_g00654 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Len_g13542 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Len_g13668 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04933 HEC2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g08868 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g21546 UNE12 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g37113 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37660 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Lfl_g39480 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
MA_120179g0010 UNE12 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_13676g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
MA_158362g0010 CIB5 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
MA_158850g0010 LRL3 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
MA_306658g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_83500g0010 HEC1 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_9115341g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Msp_g30793 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g46877 RSL2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g08799 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g12865 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g19414 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19998 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34452 RSL2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37088 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g42592 LRL3 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g43163 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44492 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Pir_g26288 No alias bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g26340 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Pir_g38111 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Pnu_g21397 RSL4 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g27016 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g28847 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Ppi_g32176 RSL2 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g56046 GT140, IND1, IND, EDA33 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g60624 CIB1 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0014.g006090 No alias bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Smo405220 HEC1 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Smo413232 RHD6 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Smo419388 RSL2 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Solyc01g107140.3.1 Solyc01g107140 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc01g109700.3.1 CIB1, Solyc01g109700 transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
Solyc02g062690.3.1 BEE2, Solyc02g062690 transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
Solyc02g091440.2.1 RHD6, Solyc02g091440 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Solyc03g113560.4.1 Solyc03g113560 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Solyc04g005130.3.1 Solyc04g005130 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc04g007300.4.1 BEE3, Solyc04g007300 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Solyc04g077960.1.1 RSL2, Solyc04g077960 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Solyc05g006650.3.1 Solyc05g006650 transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
Solyc11g005780.3.1 HEC3, Solyc11g005780 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc12g088380.1.1 RSL2, Solyc12g088380 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc12g098620.2.1 Solyc12g098620 transcription factor (bHLH). transcriptional regulator (CIB) 0.05 OrthoFinder output from all 47 species
Spa_g38143 ATRSL1, RSL1 bHLH-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Spa_g39495 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40542 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g41479 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47496 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21077 BPEp, ZCW32, BPE, BPEub regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Tin_g31631 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Tin_g38256 RSL2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e015610_P001 RHD6, Zm00001e015610 transcription factor (bHLH) 0.06 OrthoFinder output from all 47 species
Zm00001e020012_P001 Zm00001e020012 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e021883_P001 HEC3, Zm00001e021883 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e022005_P003 Zm00001e022005 transcription factor (bHLH). transcriptional regulator (CIB) 0.07 OrthoFinder output from all 47 species
Zm00001e027758_P002 Zm00001e027758 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e029147_P001 HEC3, Zm00001e029147 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e032280_P001 Zm00001e032280 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
Zm00001e034339_P001 HEC1, Zm00001e034339 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Zm00001e036318_P001 LRL1, Zm00001e036318 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
Zm00001e041668_P001 PIL5, PIF1,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004252 serine-type endopeptidase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0005506 iron ion binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0020037 heme binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 151 198
No external refs found!