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  5. Solyc12g038440.1.1

Solyc12g038440.1.1 (HRE2, Solyc12g038440)


Aliases : HRE2, Solyc12g038440

Description : no hits & (original description: none)


Gene families : OG0000003 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g038440.1.1
Cluster HCCA: Cluster_13

Target Alias Description ECC score Gene Family Method Actions
AT1G28360 ATERF12, ERF12 ERF domain protein 12 0.1 OrthoFinder output from all 47 species
AT5G05410 DREB2A, DREB2 DRE-binding protein 2A 0.01 OrthoFinder output from all 47 species
AT5G53290 CRF3 cytokinin response factor 3 0.01 OrthoFinder output from all 47 species
Adi_g001941 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g022904 No alias subgroup ERF-I transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g036158 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Adi_g041739 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g044380 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.02 OrthoFinder output from all 47 species
Adi_g054332 DREB2A, DREB2 subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Adi_g056295 ERF110 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056297 ERF110 transcription factor component *(HRE/RAP2.12) of... 0.03 OrthoFinder output from all 47 species
Adi_g072233 RAP2.6 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074528 ERF-1, ATERF-1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g00845 ATERF3, ERF3 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Ala_g10901 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g55712 ERF-6-6, ERF6, ATERF6 subgroup ERF-IX transcription factor & original description: none 0.12 OrthoFinder output from all 47 species
Aspi01Gene00047.t1 TINY2, Aspi01Gene00047 subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene01047.t1 Aspi01Gene01047 subgroup ERF-V transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene01048.t1 Aspi01Gene01048 subgroup ERF-V transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene05387.t1 Aspi01Gene05387 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene05550.t1 Aspi01Gene05550 subgroup ERF-I transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene05675.t1 Aspi01Gene05675 subgroup ERF-III transcription factor & original... 0.1 OrthoFinder output from all 47 species
Aspi01Gene05675.t2 Aspi01Gene05675 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene05774.t1 Aspi01Gene05774 subgroup ERF-V transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene06522.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene07060.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene07506.t1 ATERF-9, ERF9,... not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene07603.t1 DEAR1, CEJ1,... subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene09666.t1 TINY2, Aspi01Gene09666 subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene11862.t1 ATERF12, ERF12,... subgroup ERF-VIII transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene17041.t1 Aspi01Gene17041 subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene21143.t1 ATERF4, RAP2.5,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene23166.t1 DREB26, Aspi01Gene23166 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene23658.t1 HRE2, Aspi01Gene23658 transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aspi01Gene24408.t1 DEAR2, Aspi01Gene24408 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene30897.t1 ERF-1, ATERF-1,... subgroup ERF-IX transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene32060.t1 Aspi01Gene32060 subgroup ERF-IX transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene32071.t1 Aspi01Gene32071 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene32072.t1 Aspi01Gene32072 subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.01 OrthoFinder output from all 47 species
Aspi01Gene32074.t1 Aspi01Gene32074 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34449.t1 Aspi01Gene34449 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene34451.t1 Aspi01Gene34451 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34458.t1 DEAR2, Aspi01Gene34458 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene37344.t1 Aspi01Gene37344 subgroup ERF-V transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene47230.t1 TINY2, Aspi01Gene47230 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene47263.t1 tny, Aspi01Gene47263 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene48121.t1 Aspi01Gene48121 not classified & original description: none 0.33 OrthoFinder output from all 47 species
Aspi01Gene49723.t1 HRE2, Aspi01Gene49723 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Aspi01Gene49728.t1 HRE2, Aspi01Gene49728 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene49729.t1 HRE2, Aspi01Gene49729 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49730.t1 HRE2, Aspi01Gene49730 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene51269.t1 TINY2, Aspi01Gene51269 subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene53872.t1 DEAR1, CEJ1,... not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene58502.t1 Aspi01Gene58502 subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Aspi01Gene59644.t1 Rap2.6L, Aspi01Gene59644 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene61392.t1 DREB26, Aspi01Gene61392 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene62044.t1 CRF3, Aspi01Gene62044 subgroup ERF-VI transcription factor & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene63647.t1 ERF72, EBP,... transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Aspi01Gene63662.t1 HRE2, Aspi01Gene63662 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Aspi01Gene65341.t1 Aspi01Gene65341 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene69728.t1 RAP2.2, Aspi01Gene69728 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Aspi01Gene72133.t1 TINY2, Aspi01Gene72133 subgroup ERF-III transcription factor & original... 0.01 OrthoFinder output from all 47 species
Dac_g02023 TINY2 subgroup ERF-III transcription factor & original... 0.02 OrthoFinder output from all 47 species
Dac_g20220 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g22327 ERF72, EBP, ATEBP, RAP2.3 transcription factor component *(HRE/RAP2.12) of... 0.01 OrthoFinder output from all 47 species
Dde_g22670 Rap2.6L not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dde_g25217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os03g08470.1 RAP2.12, LOC_Os03g08470 Ethylene-responsive transcription factor 1 OS=Oryza... 0.02 OrthoFinder output from all 47 species
LOC_Os08g41030.1 LOC_Os08g41030 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species
Len_g25467 RAP2.4 subgroup ERF-I transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g39445 HRE1 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Len_g48769 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.01 OrthoFinder output from all 47 species
MA_10427743g0020 TMO3, CRF2 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Msp_g07523 ATERF4, RAP2.5,... subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Msp_g08809 CRF4 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08810 CRF4 subgroup ERF-VI transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25672 DREB26 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ore_g13982 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.05 OrthoFinder output from all 47 species
Ore_g44026 ATERF11, ERF11 subgroup ERF-VIII transcription factor & original... 0.02 OrthoFinder output from all 47 species
Pir_g25005 No alias subgroup ERF-IX transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g39807 DEAR1, CEJ1, ATERF#011 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g11929 DEAR2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Ppi_g15852 No alias subgroup ERF-II transcription factor *(ERF16/17/18) &... 0.01 OrthoFinder output from all 47 species
Sam_g15306 No alias subgroup ERF-IV/DREB2 transcription factor & original... 0.03 OrthoFinder output from all 47 species
Sam_g18921 No alias transcription factor component *(HRE/RAP2.12) of... 0.02 OrthoFinder output from all 47 species
Sam_g34704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g39915 No alias subgroup ERF-VIII transcription factor & original... 0.03 OrthoFinder output from all 47 species
Solyc01g005630.3.1 RAP2.11, Solyc01g005630 transcription factor (ERF). transcription factor (ERN1) 0.01 OrthoFinder output from all 47 species
Solyc02g090770.1.1 ERF110, Solyc02g090770 transcription factor (ERF) 0.01 OrthoFinder output from all 47 species
Solyc06g054630.3.1 Solyc06g054630 transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Solyc08g007820.1.1 CBF4, DREB1D,... transcription factor (DREB) 0.01 OrthoFinder output from all 47 species
Solyc08g007830.1.1 DDF1, Solyc08g007830 Dehydration-responsive element-binding protein 1F... 0.01 OrthoFinder output from all 47 species
Solyc08g007840.3.1 Solyc08g007840 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc09g091950.1.1 Solyc09g091950 transcription factor (DREB) 0.02 OrthoFinder output from all 47 species
Solyc12g044390.3.1 TINY2, Solyc12g044390 transcription factor (DREB) 0.04 OrthoFinder output from all 47 species
Spa_g51954 DEAR1, CEJ1, ATERF#011 subgroup ERF-II transcription factor *(ERF19/20) &... 0.02 OrthoFinder output from all 47 species
Tin_g20867 HRE2 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Tin_g25197 TINY2 subgroup ERF-III transcription factor & original... 0.03 OrthoFinder output from all 47 species
Zm00001e038888_P001 Zm00001e038888 transcription factor (DREB) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 10 57
No external refs found!