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  5. Solyc12g042570.2.1

Solyc12g042570.2.1 (Solyc12g042570)


Aliases : Solyc12g042570

Description : clade I phosphatase


Gene families : OG0002591 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002591_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g042570.2.1

Target Alias Description ECC score Gene Family Method Actions
Dde_g26768 No alias clade I phosphatase & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g18159 No alias clade I phosphatase & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
BP GO:0006397 mRNA processing IEP HCCA
BP GO:0016070 RNA metabolic process IEP HCCA
BP GO:0016071 mRNA metabolic process IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR001932 PPM-type_phosphatase-like_dom 157 314
IPR001932 PPM-type_phosphatase-like_dom 23 102
No external refs found!