Aliases : Solyc12g044720
Description : component RPL28 of LSU proteome component
Gene families : OG0000910 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000910_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00036p00210210 | evm_27.TU.AmTr_v1... | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
| AT2G19730 | No alias | Ribosomal L28e protein family | 0.11 | OrthoFinder output from all 47 species | |
| AT4G29410 | No alias | Ribosomal L28e protein family | 0.1 | OrthoFinder output from all 47 species | |
| Adi_g025177 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g03520 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Ala_g00426 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Aob_g37483 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g00977 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Azfi_s0191.g057028 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.25G035500.1 | Ceric.25G035500 | component *(eL28) of large ribosomal-subunit (LSU)... | 0.07 | OrthoFinder output from all 47 species | |
| Cpa|evm.model.tig00020710.93 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.05 | OrthoFinder output from all 47 species | |
| Cre11.g467578 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.14 | OrthoFinder output from all 47 species | |
| Dac_g26158 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Dcu_g14613 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| GSVIVT01016895001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.12 | OrthoFinder output from all 47 species | |
| GSVIVT01035350001 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.08 | OrthoFinder output from all 47 species | |
| Gb_38783 | No alias | component RPL28 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os01g51020.1 | LOC_Os01g51020 | component RPL28 of LSU proteome component | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g57540.1 | LOC_Os02g57540 | component RPL28 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| LOC_Os05g46430.1 | LOC_Os05g46430 | component RPL28 of LSU proteome component | 0.11 | OrthoFinder output from all 47 species | |
| Lfl_g24992 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| MA_10428490g0010 | No alias | component RPL28 of LSU proteome component | 0.06 | OrthoFinder output from all 47 species | |
| Mp1g26940.1 | No alias | component RPL28 of LSU proteome component | 0.14 | OrthoFinder output from all 47 species | |
| Msp_g10686 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Nbi_g01990 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g39103 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g03637 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Pp3c14_10480V3.1 | Pp3c14_10480 | Ribosomal L28e protein family | 0.11 | OrthoFinder output from all 47 species | |
| Pp3c17_14060V3.1 | Pp3c17_14060 | Ribosomal L28e protein family | 0.07 | OrthoFinder output from all 47 species | |
| Pp3c2_6100V3.1 | Pp3c2_6100 | Ribosomal L28e protein family | 0.08 | OrthoFinder output from all 47 species | |
| Ppi_g19271 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g05292 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g06119 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.04 | OrthoFinder output from all 47 species | |
| Sam_g48404 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Smo164298 | No alias | Protein biosynthesis.cytosolic ribosome.large subunit... | 0.06 | OrthoFinder output from all 47 species | |
| Spa_g19251 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g21825 | No alias | component *(eL28) of large ribosomal-subunit (LSU)... | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e026410_P001 | Zm00001e026410 | component RPL28 of LSU proteome component | 0.09 | OrthoFinder output from all 47 species | |
| Zm00001e032283_P002 | Zm00001e032283 | component RPL28 of LSU proteome component | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003674 | molecular_function | IEP | HCCA |
| MF | GO:0003723 | RNA binding | IEP | HCCA |
| MF | GO:0003735 | structural constituent of ribosome | IEP | HCCA |
| MF | GO:0005198 | structural molecule activity | IEP | HCCA |
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005840 | ribosome | IEP | HCCA |
| BP | GO:0006412 | translation | IEP | HCCA |
| BP | GO:0006518 | peptide metabolic process | IEP | HCCA |
| BP | GO:0006807 | nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0008150 | biological_process | IEP | HCCA |
| BP | GO:0008152 | metabolic process | IEP | HCCA |
| BP | GO:0009058 | biosynthetic process | IEP | HCCA |
| BP | GO:0009059 | macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0009987 | cellular process | IEP | HCCA |
| BP | GO:0019538 | protein metabolic process | IEP | HCCA |
| BP | GO:0034641 | cellular nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0034645 | cellular macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0043043 | peptide biosynthetic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043603 | amide metabolic process | IEP | HCCA |
| BP | GO:0043604 | amide biosynthetic process | IEP | HCCA |
| BP | GO:0044237 | cellular metabolic process | IEP | HCCA |
| BP | GO:0044238 | primary metabolic process | IEP | HCCA |
| BP | GO:0044249 | cellular biosynthetic process | IEP | HCCA |
| BP | GO:0044260 | cellular macromolecule metabolic process | IEP | HCCA |
| BP | GO:0044271 | cellular nitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:0071704 | organic substance metabolic process | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901564 | organonitrogen compound metabolic process | IEP | HCCA |
| BP | GO:1901566 | organonitrogen compound biosynthetic process | IEP | HCCA |
| BP | GO:1901576 | organic substance biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR029004 | L28e/Mak16 | 8 | 128 |
| No external refs found! |
