Solyc12g056200.2.1 (Solyc12g056200)


Aliases : Solyc12g056200

Description : no hits & (original description: none)


Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g056200.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00143300 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT4G11350 No alias Protein of unknown function (DUF604) 0.05 OrthoFinder output from all 47 species
AT5G12460 No alias Protein of unknown function (DUF604) 0.05 OrthoFinder output from all 47 species
Aev_g06045 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09753 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35672.t1 Aspi01Gene35672 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59501.t1 Aspi01Gene59501 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g02802 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g13108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01024903001 No alias No description available 0.02 OrthoFinder output from all 47 species
LOC_Os03g16290.1 LOC_Os03g16290 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Lfl_g16356 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05801 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g44616 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g15705 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g10667 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g006770.2.1 Solyc01g006770 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc07g052630.3.1 Solyc07g052630 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g011090.3.1 Solyc09g011090 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc11g065440.3.1 Solyc11g065440 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g065480.3.1 Solyc11g065480 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g099680.1.1 Solyc12g099680 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Spa_g24720 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001192_P001 Zm00001e001192 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Zm00001e007164_P001 Zm00001e007164 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR006740 DUF604 230 483
No external refs found!