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  5. Solyc12g056220.2.1

Solyc12g056220.2.1 (PIP1C, TMP-B, PIP1;3,...)


Aliases : PIP1C, TMP-B, PIP1;3, Solyc12g056220

Description : plasma membrane intrinsic protein (PIP)


Gene families : OG0000095 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000095_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g056220.2.1

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00009p00231200 TMP-C, PIP1;4,... Solute transport.channels.MIP family.plasma membrane... 0.04 OrthoFinder output from all 47 species
AMTR_s00155p00061840 PIP2B, PIP2;2,... Solute transport.channels.MIP family.plasma membrane... 0.03 OrthoFinder output from all 47 species
AT1G01620 PIP1C, TMP-B, PIP1;3 plasma membrane intrinsic protein 1C 0.03 OrthoFinder output from all 47 species
AT1G17810 BETA-TIP beta-tonoplast intrinsic protein 0.02 OrthoFinder output from all 47 species
AT1G73190 ALPHA-TIP, TIP3;1 Aquaporin-like superfamily protein 0.02 OrthoFinder output from all 47 species
Adi_g018646 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g032464 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Adi_g039474 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g050088 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g089214 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.04 OrthoFinder output from all 47 species
Aev_g02921 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g28128 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Ala_g23324 ATTIP2;1,... tonoplast intrinsic protein *(TIP) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g09385 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene26198.t1 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene72554.t1 ATTIP2;1,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0009.g011900 No alias not classified & original description: CDS=1-480 0.08 OrthoFinder output from all 47 species
Cba_g15493 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Ceric.1Z269000.1 BETA-TIP, Ceric.1Z269000 tonoplast intrinsic protein *(TIP) & original... 0.02 OrthoFinder output from all 47 species
Dac_g02004 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08474 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Dac_g17587 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g45536 ATTIP2;1,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g04391 TIP1;2, TIP2,... tonoplast intrinsic protein *(TIP) & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g42913 PIP3, SIMIP,... plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Dde_g21631 PIP1;5, PIP1D plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
GSVIVT01018189001 No alias Solute transport.channels.MIP family.tonoplast intrinsic... 0.02 OrthoFinder output from all 47 species
GSVIVT01018678001 TIP5;1 Solute transport.channels.MIP family.tonoplast intrinsic... 0.02 OrthoFinder output from all 47 species
GSVIVT01024235001 BETA-TIP Solute transport.channels.MIP family.tonoplast intrinsic... 0.02 OrthoFinder output from all 47 species
GSVIVT01025681001 PIP2D, PIP2;5 Solute transport.channels.MIP family.plasma membrane... 0.02 OrthoFinder output from all 47 species
GSVIVT01035640001 TIP4;1 Solute transport.channels.MIP family.tonoplast intrinsic... 0.04 OrthoFinder output from all 47 species
Gb_02400 ATTIP2;1,... tonoplast intrinsic protein (TIP) 0.02 OrthoFinder output from all 47 species
Gb_02402 TIP4;1 tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
Gb_26586 GAMMA-TIP,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
LOC_Os04g16450.1 PIP3B, PIP2;8,... plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Lfl_g04447 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.03 OrthoFinder output from all 47 species
Lfl_g04620 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.05 OrthoFinder output from all 47 species
Lfl_g12467 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.02 OrthoFinder output from all 47 species
MA_10426681g0010 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.1 OrthoFinder output from all 47 species
MA_11327g0010 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.05 OrthoFinder output from all 47 species
MA_123344g0010 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
MA_191627g0010 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.04 OrthoFinder output from all 47 species
MA_629271g0010 PIP3B, PIP2;8 Probable aquaporin PIP2-8 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_671655g0010 PIP1;5, PIP1D plasma membrane intrinsic protein (PIP) 0.04 OrthoFinder output from all 47 species
MA_6749557g0010 ATTIP2;1,... no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
MA_68132g0010 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
MA_72395g0010 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.06 OrthoFinder output from all 47 species
MA_9821440g0010 PIP3B, PIP2;8 plasma membrane intrinsic protein (PIP) 0.02 OrthoFinder output from all 47 species
Nbi_g00359 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g08152 PIP3B, PIP2;8 plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Nbi_g12843 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.04 OrthoFinder output from all 47 species
Ore_g26066 TIP1;2, TIP2,... tonoplast intrinsic protein *(TIP) & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g30287 GAMMA-TIP,... tonoplast intrinsic protein *(TIP) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g34411 ATTIP1.3,... tonoplast intrinsic protein *(TIP) & original description: none 0.06 OrthoFinder output from all 47 species
Pir_g13713 GAMMA-TIP,... not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g12266 TMP-C, PIP1;4, PIP1E plasma membrane intrinsic protein *(PIP) & original... 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0006.g002971 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0064.g015869 PIP1A, PIP1;1,... plasma membrane intrinsic protein *(PIP) & original... 0.02 OrthoFinder output from all 47 species
Smo98603 PIP2;4, PIP2F Solute transport.channels.MIP family.plasma membrane... 0.06 OrthoFinder output from all 47 species
Solyc06g060760.3.1 DELTA-TIP2,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
Solyc06g074820.3.1 GAMMA-TIP,... tonoplast intrinsic protein (TIP) 0.04 OrthoFinder output from all 47 species
Solyc06g075650.3.1 ATTIP1.3,... tonoplast intrinsic protein (TIP) 0.03 OrthoFinder output from all 47 species
Solyc08g066840.3.1 TIP4;1, Solyc08g066840 tonoplast intrinsic protein (TIP) 0.07 OrthoFinder output from all 47 species
Spa_g01521 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.04 OrthoFinder output from all 47 species
Spa_g06822 ATTIP2;1,... tonoplast intrinsic protein *(TIP) & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g23442 PIP2;1, PIP2, PIP2A plasma membrane intrinsic protein *(PIP) & original... 0.06 OrthoFinder output from all 47 species
Zm00001e012616_P002 BETA-TIP, Zm00001e012616 tonoplast intrinsic protein (TIP) 0.02 OrthoFinder output from all 47 species
Zm00001e015330_P001 DELTA-TIP3,... tonoplast intrinsic protein (TIP) 0.02 OrthoFinder output from all 47 species
Zm00001e033411_P002 PIP2;1, PIP2,... plasma membrane intrinsic protein (PIP) 0.04 OrthoFinder output from all 47 species
Zm00001e036141_P001 TMP-C, PIP1;4,... plasma membrane intrinsic protein (PIP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA Interproscan
CC GO:0016020 membrane IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000425 MIP 45 274
No external refs found!