Solyc12g056350.2.1 (Solyc12g056350)


Aliases : Solyc12g056350

Description : no hits & (original description: none)


Gene families : OG0001420 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001420_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g056350.2.1

Target Alias Description ECC score Gene Family Method Actions
AT2G32500 No alias Stress responsive alpha-beta barrel domain protein 0.04 OrthoFinder output from all 47 species
Aev_g25561 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g08454 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g12201 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01019803001 No alias No description available 0.02 OrthoFinder output from all 47 species
Len_g23710 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g08947 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12186 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g09884 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0004175 endopeptidase activity IEP HCCA
MF GO:0004222 metalloendopeptidase activity IEP HCCA
BP GO:0006364 rRNA processing IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008237 metallopeptidase activity IEP HCCA
BP GO:0016072 rRNA metabolic process IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
BP GO:0034470 ncRNA processing IEP HCCA
BP GO:0034660 ncRNA metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR013097 Dabb 73 167
IPR013097 Dabb 221 282
No external refs found!