Aliases : Solyc12g088740
Description : Probable E3 ubiquitin-protein ligase RHG1A OS=Arabidopsis thaliana (sp|q9fmm4|rhg1a_arath : 211.0)
Gene families : OG0000374 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000374_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| Aev_g05529 | No alias | regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... | 0.03 | OrthoFinder output from all 47 species | |
| Als_g07557 | No alias | regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g05319 | No alias | regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... | 0.02 | OrthoFinder output from all 47 species | |
| Aop_g04919 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene12065.t1 | Aspi01Gene12065 | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g13384 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Cba_g16424 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g36375 | No alias | regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.03G023000.1 | Ceric.03G023000 | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.26G008400.1 | Ceric.26G008400 | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Dac_g01777 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g09181 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Ehy_g12443 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Ehy_g31158 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.05 | OrthoFinder output from all 47 species | |
| LOC_Os05g48970.1 | LOC_Os05g48970 | Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g29258 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Mp1g11510.1 | No alias | Probable E3 ubiquitin-protein ligase HIP1 OS=Oryza... | 0.02 | OrthoFinder output from all 47 species | |
| Nbi_g05779 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g15282 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Ore_g32526 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.04 | OrthoFinder output from all 47 species | |
| Pir_g09761 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g24167 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g04074 | No alias | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sam_g12356 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g16722 | No alias | RING-H2-class CTL-subclass E3 ubiquitin ligase &... | 0.03 | OrthoFinder output from all 47 species | |
| Smo447294 | No alias | Protein degradation.peptide tagging.Ubiquitin... | 0.02 | OrthoFinder output from all 47 species | |
| Solyc07g062720.3.1 | Solyc07g062720 | Probable E3 ubiquitin-protein ligase ZFP1 OS=Oryza... | 0.03 | OrthoFinder output from all 47 species | |
| Tin_g31415 | No alias | RING-H2-class CTL-subclass E3 ubiquiTin ligase &... | 0.02 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000123 | histone acetyltransferase complex | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0018130 | heterocycle biosynthetic process | IEP | HCCA |
| BP | GO:0019438 | aromatic compound biosynthetic process | IEP | HCCA |
| CC | GO:0031248 | protein acetyltransferase complex | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| CC | GO:0070461 | SAGA-type complex | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| BP | GO:1901362 | organic cyclic compound biosynthetic process | IEP | HCCA |
| CC | GO:1902493 | acetyltransferase complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
| CC | GO:1990234 | transferase complex | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR001841 | Znf_RING | 646 | 687 |
| No external refs found! |
