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  5. Solyc12g088830.3.1

Solyc12g088830.3.1 (WEB1, Solyc12g088830)


Aliases : WEB1, Solyc12g088830

Description : component WEB1 of WEB1-PMI2 cp-actin filament reorganisation complex


Gene families : OG0000579 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000579_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g088830.3.1
Cluster HCCA: Cluster_73

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00060p00027040 WEB1,... Cytoskeleton.cp-actin-dependent plastid... 0.03 OrthoFinder output from all 47 species
AMTR_s00061p00194590 evm_27.TU.AmTr_v1... WEB family protein At5g55860 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AT1G12150 No alias Plant protein of unknown function (DUF827) 0.09 OrthoFinder output from all 47 species
AT1G45545 No alias Plant protein of unknown function (DUF827) 0.02 OrthoFinder output from all 47 species
AT4G17210 No alias Plant protein of unknown function (DUF827) 0.07 OrthoFinder output from all 47 species
AT4G33390 No alias Plant protein of unknown function (DUF827) 0.04 OrthoFinder output from all 47 species
AT5G42880 No alias Plant protein of unknown function (DUF827) 0.05 OrthoFinder output from all 47 species
AT5G55860 No alias Plant protein of unknown function (DUF827) 0.04 OrthoFinder output from all 47 species
Adi_g105451 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g12833 WEB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g14521 WEB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20853 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g32868 WEB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37825 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000960 No alias not classified & original description: CDS=6-1973 0.03 OrthoFinder output from all 47 species
Ceric.1Z051600.1 Ceric.1Z051600 not classified & original description: pacid=50565823... 0.03 OrthoFinder output from all 47 species
Gb_09422 No alias regulator protein (WALLIN) of actin organisation 0.01 OrthoFinder output from all 47 species
LOC_Os03g27800.1 LOC_Os03g27800 component WEB1 of WEB1-PMI2 cp-actin filament... 0.03 OrthoFinder output from all 47 species
LOC_Os09g28450.1 LOC_Os09g28450 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1... 0.09 OrthoFinder output from all 47 species
LOC_Os12g17310.1 LOC_Os12g17310 WEB family protein At5g55860 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Msp_g06116 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g25980 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g07131 WEB1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g35433 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g02196 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc04g015110.3.1 Solyc04g015110 WEB family protein At5g55860 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g08785 WEB1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e001910_P001 WEB1, Zm00001e001910 component WEB1 of WEB1-PMI2 cp-actin filament... 0.04 OrthoFinder output from all 47 species
Zm00001e009948_P001 Zm00001e009948 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1... 0.07 OrthoFinder output from all 47 species
Zm00001e034348_P003 Zm00001e034348 Protein WEAK CHLOROPLAST MOVEMENT UNDER BLUE LIGHT 1... 0.09 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0003779 actin binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005516 calmodulin binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006807 nitrogen compound metabolic process IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015299 obsolete solute:proton antiporter activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043170 macromolecule metabolic process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR008545 Web 164 730
No external refs found!