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  5. Solyc12g095850.2.1

Solyc12g095850.2.1 (OVA4, Solyc12g095850)


Aliases : OVA4, Solyc12g095850

Description : tryptophan-tRNA ligase


Gene families : OG0006953 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006953_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g095850.2.1

Target Alias Description ECC score Gene Family Method Actions
AT2G25840 OVA4 Nucleotidylyl transferase superfamily protein 0.12 OrthoFinder output from all 47 species
Adi_g049439 OVA4 organellar tryptophan-tRNA ligase & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g09607 OVA4 organellar tryptophan-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g38239 OVA4 organellar tryptophan-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0029.g024201 OVA4 organellar tryptophan-tRNA ligase & original... 0.07 OrthoFinder output from all 47 species
Ceric.16G037600.1 OVA4, Ceric.16G037600 organellar tryptophan-tRNA ligase & original... 0.03 OrthoFinder output from all 47 species
Ceric.1Z156000.1 OVA4, Ceric.1Z156000 organellar tryptophan-tRNA ligase & original... 0.04 OrthoFinder output from all 47 species
Cre05.g238322 OVA4 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.03 OrthoFinder output from all 47 species
Dde_g12437 OVA4 organellar tryptophan-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g10255 OVA4 organellar tryptophan-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035293001 OVA4 Protein biosynthesis.aminoacyl-tRNA synthetase... 0.05 OrthoFinder output from all 47 species
Gb_29721 OVA4 tryptophan-tRNA ligase 0.07 OrthoFinder output from all 47 species
LOC_Os01g54020.1 OVA4, LOC_Os01g54020 tryptophan-tRNA ligase 0.03 OrthoFinder output from all 47 species
Len_g30338 OVA4 organellar tryptophan-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Mp2g18820.1 OVA4 tryptophan-tRNA ligase 0.04 OrthoFinder output from all 47 species
Ore_g25968 OVA4 organellar tryptophan-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g11182 OVA4 organellar tryptophan-tRNA ligase & original description: none 0.03 OrthoFinder output from all 47 species
Pp3c13_12220V3.1 OVA4, Pp3c13_12220 Nucleotidylyl transferase superfamily protein 0.01 OrthoFinder output from all 47 species
Ppi_g61657 OVA4 organellar tryptophan-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0007.g003476 OVA4 organellar tryptophan-tRNA ligase & original... 0.03 OrthoFinder output from all 47 species
Sam_g35390 No alias organellar tryptophan-tRNA ligase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEA Interproscan
MF GO:0004812 aminoacyl-tRNA ligase activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
BP GO:0006418 tRNA aminoacylation for protein translation IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0008483 transaminase activity IEP HCCA
MF GO:0016769 transferase activity, transferring nitrogenous groups IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR002305 aa-tRNA-synth_Ic 72 363
No external refs found!