Solyc12g096650.2.1 (VPS20.2, Solyc12g096650)

Aliases : VPS20.2, Solyc12g096650

Description : component VPS20 of ESCRT-III complex

Gene families : OG0004858 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0004858_tree

Sequence : coding (download), protein (download)

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Solyc12g096650.2.1

Target	Alias	Description	ECC score	Gene Family Method
Ceric.24G055100.1	VPS20.2, Ceric.24G055100	component *(VPS20) of ESCRT-III complex & original...	0.05	OrthoFinder output from all 47 species
LOC_Os02g38300.1	VPS20.1, LOC_Os02g38300	component VPS20 of ESCRT-III complex	0.08	OrthoFinder output from all 47 species
MA_10433802g0010	VPS20.2	component VPS20 of ESCRT-III complex	0.04	OrthoFinder output from all 47 species
Pir_g12438	VPS20.2	component *(VPS20) of ESCRT-III complex & original...	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0006810	transport	None	Extended
BP	GO:0007034	vacuolar transport	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0046907	intracellular transport	None	Extended
BP	GO:0051179	localization	None	Extended
BP	GO:0051234	establishment of localization	None	Extended
BP	GO:0051641	cellular localization	None	Extended
BP	GO:0051649	establishment of localization in cell	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005484	SNAP receptor activity	IEP	HCCA
BP	GO:0006886	intracellular protein transport	IEP	HCCA
BP	GO:0006890	retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum	IEP	HCCA
BP	GO:0006914	autophagy	IEP	HCCA
BP	GO:0008104	protein localization	IEP	HCCA
BP	GO:0009056	catabolic process	IEP	HCCA
BP	GO:0015031	protein transport	IEP	HCCA
BP	GO:0016192	vesicle-mediated transport	IEP	HCCA
MF	GO:0030674	protein-macromolecule adaptor activity	IEP	HCCA
BP	GO:0033036	macromolecule localization	IEP	HCCA
BP	GO:0044248	cellular catabolic process	IEP	HCCA
BP	GO:0045184	establishment of protein localization	IEP	HCCA
BP	GO:0048193	Golgi vesicle transport	IEP	HCCA
MF	GO:0060090	molecular adaptor activity	IEP	HCCA
BP	GO:0061919	process utilizing autophagic mechanism	IEP	HCCA
BP	GO:0070727	cellular macromolecule localization	IEP	HCCA
BP	GO:0071702	organic substance transport	IEP	HCCA
BP	GO:0071705	nitrogen compound transport	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR005024	Snf7_fam	17	196

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