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  5. Solyc12g096890.1.1

Solyc12g096890.1.1 (AtPP2-B10, PP2-B10,...)


Aliases : AtPP2-B10, PP2-B10, Solyc12g096890

Description : F-box protein PP2-B10 OS=Arabidopsis thaliana (sp|q9zvq6|p2b10_arath : 132.0)


Gene families : OG0000279 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000279_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g096890.1.1
Cluster HCCA: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
AT1G56240 PP2-B13, AtPP2-B13 phloem protein 2-B13 0.05 OrthoFinder output from all 47 species
AT1G56250 PP2-B14, AtPP2-B14 phloem protein 2-B14 0.05 OrthoFinder output from all 47 species
AT2G02320 AtPP2-B7, PP2-B7 phloem protein 2-B7 0.04 OrthoFinder output from all 47 species
Adi_g048049 MEE66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g15955 AtPP2-B8, PP2-B8 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g36351 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55186.t1 AtPP2-B8,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene55189.t2 ATPP2-A4,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38846 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g17005 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g14188 AtPP2-B7, PP2-B7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g21011 ATPP2-B11, PP2-B11 not classified & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01026408001 No alias No description available 0.05 OrthoFinder output from all 47 species
LOC_Os02g56800.1 AtPP2-B2,... Putative F-box protein PP2-B2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os02g56810.1 AtPP2-B2,... no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
LOC_Os02g56820.1 MEE66, LOC_Os02g56820 F-box protein At2g02240 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os12g03740.1 AtPP2-B10,... F-box protein PP2-B10 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_82511g0010 AtPP2-B8, PP2-B8 Putative F-box protein PP2-B8 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Pir_g37850 PP2-A14, AtPP2-A14 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g44753 AtPP2-B1, PP2-B1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc01g100010.3.1 PP2-B15,... F-box protein PP2-B15 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Solyc10g017960.2.1 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species
Solyc10g051160.2.1 MEE66, Solyc10g051160 Putative F-box protein PP2-B12 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Zm00001e041427_P001 AtPP2-A13,... component FBX of SCF E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
MF GO:0004842 ubiquitin-protein transferase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008037 cell recognition IEP HCCA
BP GO:0016567 protein ubiquitination IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
BP GO:0019538 protein metabolic process IEP HCCA
MF GO:0019787 ubiquitin-like protein transferase activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0048544 recognition of pollen IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
BP GO:1901564 organonitrogen compound metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR025886 PP2-like 1 159
No external refs found!