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  5. Solyc12g099680.1.1

Solyc12g099680.1.1 (Solyc12g099680)


Aliases : Solyc12g099680

Description : no hits & (original description: none)


Gene families : OG0000352 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000352_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g099680.1.1
Cluster HCCA: Cluster_61

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00041p00143300 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
AT5G12460 No alias Protein of unknown function (DUF604) 0.07 OrthoFinder output from all 47 species
Adi_g081779 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g47455 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g03354 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene20843.t1 Aspi01Gene20843 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene59505.t1 Aspi01Gene59505 not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01019400001 No alias No description available 0.03 OrthoFinder output from all 47 species
GSVIVT01024903001 No alias No description available 0.04 OrthoFinder output from all 47 species
GSVIVT01025084001 No alias No description available 0.03 OrthoFinder output from all 47 species
Gb_04629 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_12418 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_36870 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_39622 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os02g31210.1 LOC_Os02g31210 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os03g16290.1 LOC_Os03g16290 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g45927 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g34254 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10431764g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
MA_3705655g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Ore_g37540 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g10687 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g006770.2.1 Solyc01g006770 no hits & (original description: none) 0.09 OrthoFinder output from all 47 species
Solyc01g094990.2.1 Solyc01g094990 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc09g011090.3.1 Solyc09g011090 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Solyc11g065440.3.1 Solyc11g065440 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc11g065470.2.1 Solyc11g065470 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Solyc12g056200.2.1 Solyc12g056200 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g099690.1.1 Solyc12g099690 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Solyc12g099730.3.1 Solyc12g099730 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Spa_g12649 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e007164_P001 Zm00001e007164 no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Zm00001e038263_P001 Zm00001e038263 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0004867 serine-type endopeptidase inhibitor activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0009611 response to wounding IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0051259 protein complex oligomerization IEP HCCA
BP GO:0051260 protein homooligomerization IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
InterPro domains Description Start Stop
IPR006740 DUF604 200 453
No external refs found!