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  5. Solyc12g100230.1.1

Solyc12g100230.1.1 (FAD2, Solyc12g100230)


Aliases : FAD2, Solyc12g100230

Description : omega-3/omega-6 fatty acid desaturase


Gene families : OG0001837 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001837_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Solyc12g100230.1.1
Cluster HCCA: Cluster_82

Target Alias Description ECC score Gene Family Method Actions
Ala_g03407 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Als_g50821 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.05 OrthoFinder output from all 47 species
Aop_g07874 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene60408.t1 FAD2, Aspi01Gene60408 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene70651.t1 FAD2, Aspi01Gene70651 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0028.g023866 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Cba_g03173 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Ceric.15G005300.1 FAD2, Ceric.15G005300 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Ehy_g22864 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.05 OrthoFinder output from all 47 species
GSVIVT01025364001 FAD2 Lipid metabolism.fatty acid synthesis.fatty acid... 0.05 OrthoFinder output from all 47 species
Gb_21050 FAD2 omega-3/omega-6 fatty acid desaturase 0.03 OrthoFinder output from all 47 species
Gb_32340 FAD2 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species
LOC_Os02g48560.1 FAD2, LOC_Os02g48560 omega-3/omega-6 fatty acid desaturase 0.07 OrthoFinder output from all 47 species
LOC_Os07g23430.1 FAD2, LOC_Os07g23430 omega-3/omega-6 fatty acid desaturase 0.05 OrthoFinder output from all 47 species
Len_g14321 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Len_g18223 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Mp2g02590.1 FAD2 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species
Msp_g27488 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.05 OrthoFinder output from all 47 species
Ore_g12610 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Ore_g41430 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0068.g016352 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Sam_g07496 No alias delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Solyc03g058430.3.1 FAD2, Solyc03g058430 omega-3/omega-6 fatty acid desaturase 0.04 OrthoFinder output from all 47 species
Solyc04g040130.1.1 FAD2, Solyc04g040130 omega-3/omega-6 fatty acid desaturase 0.07 OrthoFinder output from all 47 species
Solyc12g045035.1.1 FAD2, Solyc12g045035 omega-3/omega-6 fatty acid desaturase 0.05 OrthoFinder output from all 47 species
Solyc12g045037.1.1 FAD2, Solyc12g045037 omega-3/omega-6 fatty acid desaturase 0.04 OrthoFinder output from all 47 species
Solyc12g049030.1.1 FAD2, Solyc12g049030 omega-3/omega-6 fatty acid desaturase 0.05 OrthoFinder output from all 47 species
Spa_g11252 FAD2 delta-12/delta-15 fatty acid desaturase & original... 0.03 OrthoFinder output from all 47 species
Zm00001e039637_P001 FAD2, Zm00001e039637 omega-3/omega-6 fatty acid desaturase 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0006629 lipid metabolic process IEA Interproscan
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEA Interproscan
BP GO:0055114 obsolete oxidation-reduction process IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0004097 catechol oxidase activity IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
MF GO:0004650 polygalacturonase activity IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005618 cell wall IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
MF GO:0008146 sulfotransferase activity IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
MF GO:0016679 oxidoreductase activity, acting on diphenols and related substances as donors IEP HCCA
MF GO:0016682 oxidoreductase activity, acting on diphenols and related substances as donors, oxygen as acceptor IEP HCCA
MF GO:0016762 xyloglucan:xyloglucosyl transferase activity IEP HCCA
MF GO:0016782 transferase activity, transferring sulphur-containing groups IEP HCCA
MF GO:0016787 hydrolase activity IEP HCCA
MF GO:0016788 hydrolase activity, acting on ester bonds IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
MF GO:0016849 phosphorus-oxygen lyase activity IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
CC GO:0030312 external encapsulating structure IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0033897 ribonuclease T2 activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0048046 apoplast IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR005804 FA_desaturase_dom 68 329
IPR021863 FAS_N 13 49
No external refs found!