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  5. GSVIVT01000386001

GSVIVT01000386001 (ATHB29, ZFHD1, ZHD11)


Aliases : ATHB29, ZFHD1, ZHD11

Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.zf-HD transcription factor


Gene families : OG0000204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000204_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000386001
Cluster HCCA: Cluster_6

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00261450 ATHB22, MEE68,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00038p00027320 ATHB22, MEE68,... RNA biosynthesis.transcriptional activation.HB... 0.03 OrthoFinder output from all 47 species
AMTR_s00070p00154800 ATHB22, MEE68,... RNA biosynthesis.transcriptional activation.HB... 0.04 OrthoFinder output from all 47 species
Aev_g03921 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g03723 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10862 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Gb_37393 ATHB22, MEE68, ZHD2, HB22 transcription factor (zf-HD) 0.05 OrthoFinder output from all 47 species
LOC_Os09g29130.1 ATHB22, MEE68,... transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
MA_461761g0010 AtHB31, ZHD4, HB31 transcription factor (zf-HD) 0.02 OrthoFinder output from all 47 species
Msp_g42936 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g03609 AtHB31, ZHD4, HB31 zf-HD-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10866 ATHB22, MEE68, ZHD2, HB22 zf-HD-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e034119_P001 ATHB29, ZFHD1,... transcription factor (zf-HD) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR006456 ZF_HD_homeobox_Cys/His_dimer 5 52
No external refs found!