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  5. GSVIVT01000534001

GSVIVT01000534001


Description : BTB/POZ domain-containing protein At1g67900 OS=Arabidopsis thaliana


Gene families : OG0000449 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000449_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000534001
Cluster HCCA: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
AT4G31820 MAB4, NPY1, ENP Phototropic-responsive NPH3 family protein 0.03 OrthoFinder output from all 47 species
Adi_g007915 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g15298 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Als_g17659 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Aob_g05273 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aob_g29716 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.05 OrthoFinder output from all 47 species
Aop_g07082 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene00447.t1 Aspi01Gene00447 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Aspi01Gene23539.t1 Aspi01Gene23539 substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Dde_g10844 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.04 OrthoFinder output from all 47 species
GSVIVT01012508001 RPT3, NPH3, JK218 Root phototropism protein 3 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
GSVIVT01037852001 NPY2 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g35970.1 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.03 OrthoFinder output from all 47 species
LOC_Os12g39380.1 NPY2, LOC_Os12g39380 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g07445 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Ppi_g03158 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Ppi_g49328 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001683 No alias not classified & original description: CDS=1-1248 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0119.g021263 No alias substrate adaptor of CUL3-based E3 ubiquitin ligase... 0.03 OrthoFinder output from all 47 species
Sam_g36660 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc05g013570.3.1 Solyc05g013570 BTB/POZ domain-containing protein At1g67900... 0.06 OrthoFinder output from all 47 species
Solyc10g049660.2.1 NPY2, Solyc10g049660 BTB/POZ domain-containing protein NPY2 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Zm00001e014883_P001 RPT3, NPH3,... component NPH3 of CUL3-BTB E3 ubiquitin ligase complex 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
InterPro domains Description Start Stop
IPR027356 NPH3_dom 188 242
IPR027356 NPH3_dom 254 344
No external refs found!