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  5. GSVIVT01000808001

GSVIVT01000808001 (HVA22F)


Aliases : HVA22F

Description : HVA22-like protein f OS=Arabidopsis thaliana


Gene families : OG0000842 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000842_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01000808001
Cluster HCCA: Cluster_97

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00253210 HVA22F,... HVA22-like protein f OS=Arabidopsis thaliana 0.12 OrthoFinder output from all 47 species
AT2G42820 HVA22F HVA22-like protein F 0.27 OrthoFinder output from all 47 species
AT4G24960 HVA22D, ATHVA22D HVA22 homologue D 0.03 OrthoFinder output from all 47 species
Als_g11936 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g10178 ATHVA22A, HVA22A not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G053300.1 HVA22F, Ceric.08G053300 not classified & original description: pacid=50637741... 0.03 OrthoFinder output from all 47 species
Ceric.13G028300.1 HVA22F, Ceric.13G028300 not classified & original description: pacid=50636869... 0.04 OrthoFinder output from all 47 species
Ceric.22G008400.1 HVA22F, Ceric.22G008400 not classified & original description: pacid=50614345... 0.03 OrthoFinder output from all 47 species
GSVIVT01008026001 ATHVA22A, HVA22A HVA22-like protein a OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01008576001 HVA22E, ATHVA22E HVA22-like protein e OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_16303 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
LOC_Os09g27730.1 LOC_Os09g27730 Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 114.0) 0.03 OrthoFinder output from all 47 species
LOC_Os11g38920.2 ATHVA22A,... HVA22-like protein a OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
MA_113124g0010 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
MA_62010g0010 HVA22F HVA22-like protein f OS=Arabidopsis thaliana... 0.07 OrthoFinder output from all 47 species
Msp_g09973 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37973 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g10087 HVA22F not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ppi_g50646 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18301 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g18302 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Solyc04g014420.4.1 HVA22E,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 117.0) 0.02 OrthoFinder output from all 47 species
Solyc10g007820.3.1 HVA22F, Solyc10g007820 HVA22-like protein f OS=Arabidopsis thaliana... 0.15 OrthoFinder output from all 47 species
Spa_g31014 HVA22F not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g46860 HVA22F not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e009930_P001 HVA22D,... Protein HVA22 OS=Hordeum vulgare (sp|q07764|hva22_horvu : 161.0) 0.06 OrthoFinder output from all 47 species
Zm00001e028216_P002 HVA22F, Zm00001e028216 HVA22-like protein f OS=Arabidopsis thaliana... 0.16 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005985 sucrose metabolic process IEP HCCA
BP GO:0006418 tRNA aminoacylation for protein translation IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
MF GO:0016157 sucrose synthase activity IEP HCCA
MF GO:0016798 hydrolase activity, acting on glycosyl bonds IEP HCCA
InterPro domains Description Start Stop
IPR004345 TB2_DP1_HVA22 4 78
No external refs found!