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  5. GSVIVT01001003001

GSVIVT01001003001


Description : RNA biosynthesis.RNA polymerase II-dependent transcription.SAGA transcription co-activator complex.ADA3 component


Gene families : OG0002109 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002109_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001003001

Target Alias Description ECC score Gene Family Method Actions
Adi_g052120 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05137 No alias component *(ADA3) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Als_g29245 No alias component *(ADA3) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Als_g49585 No alias component *(ADA3) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Aob_g10991 No alias component *(ADA3) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Aspi01Gene27625.t1 Aspi01Gene27625 component *(ADA3) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Ceric.03G067900.1 Ceric.03G067900 component *(ADA3) of SAGA transcription co-activator... 0.05 OrthoFinder output from all 47 species
Ceric.34G015100.1 Ceric.34G015100 component *(ADA3) of SAGA transcription co-activator... 0.02 OrthoFinder output from all 47 species
Dcu_g46147 No alias component *(ADA3) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
LOC_Os05g01690.1 LOC_Os05g01690 component ADA3 of SAGA transcription co-activator complex 0.06 OrthoFinder output from all 47 species
Len_g10698 No alias component *(ADA3) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Lfl_g10282 No alias component *(ADA3) of SAGA transcription co-activator... 0.04 OrthoFinder output from all 47 species
Mp1g06630.1 No alias component ADA3 of SAGA transcription co-activator complex 0.04 OrthoFinder output from all 47 species
Ppi_g05349 No alias component *(ADA3) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Sam_g48948 No alias component *(ADA3) of SAGA transcription co-activator... 0.03 OrthoFinder output from all 47 species
Zm00001e027665_P001 Zm00001e027665 component ADA3 of SAGA transcription co-activator complex 0.05 OrthoFinder output from all 47 species
Zm00001e029688_P001 Zm00001e029688 component ADA3 of SAGA transcription co-activator complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
InterPro domains Description Start Stop
IPR026960 RVT-Znf 218 273
No external refs found!