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  5. GSVIVT01001356001

GSVIVT01001356001


No description available


Gene families : OG0000543 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000543_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001356001

Target Alias Description ECC score Gene Family Method Actions
AT3G58000 No alias VQ motif-containing protein 0.08 OrthoFinder output from all 47 species
Adi_g041277 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g104548 No alias WRKY33-activating protein *(SIB) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36583 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g38883 No alias WRKY33-activating protein *(SIB) & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g40084 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g40085 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g25156 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g27858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g37030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g38102 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene12674.t1 Aspi01Gene12674 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene43876.t1 Aspi01Gene43876 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene46262.t1 Aspi01Gene46262 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene58865.t1 Aspi01Gene58865 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene58866.t1 Aspi01Gene58866 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene66306.t1 Aspi01Gene66306 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aspi01Gene72262.t1 Aspi01Gene72262 not classified & original description: none 0.1 OrthoFinder output from all 47 species
Cba_g46858 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G049900.1 Ceric.04G049900 not classified & original description: pacid=50632133... 0.03 OrthoFinder output from all 47 species
Ceric.10G025800.1 Ceric.10G025800 not classified & original description: pacid=50611640... 0.08 OrthoFinder output from all 47 species
Ceric.13G093600.1 Ceric.13G093600 not classified & original description: pacid=50636024... 0.03 OrthoFinder output from all 47 species
Ceric.26G063200.1 Ceric.26G063200 not classified & original description: pacid=50599234... 0.05 OrthoFinder output from all 47 species
Dac_g07235 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g45144 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g00487 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g16199 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g20584 No alias not classified & original description: none 0.08 OrthoFinder output from all 47 species
Dcu_g26136 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dcu_g26356 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dcu_g50601 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g51875 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g08114 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g16959 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26495 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Gb_37467 No alias no hits & (original description: none) 0.05 OrthoFinder output from all 47 species
Gb_40688 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
LOC_Os04g57030.1 LOC_Os04g57030 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Len_g17691 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g28990 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g29411 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
MA_122594g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g09843 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g15878 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g23495 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g46979 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g37585 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g27704 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g36109 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g44460 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18203 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g17513 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g20520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0003.g001904 No alias not classified & original description: CDS=1-351 0.05 OrthoFinder output from all 47 species
Sacu_v1.1_s0029.g010042 No alias not classified & original description: CDS=1-846 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0268.g026986 No alias not classified & original description: CDS=193-879 0.03 OrthoFinder output from all 47 species
Spa_g01899 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g03437 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g39696 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g56441 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g14289 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g32772 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
MF GO:0140110 transcription regulator activity IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR008889 VQ 39 64
No external refs found!