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  5. GSVIVT01001827001

GSVIVT01001827001


Description : 4-coumarate--CoA ligase-like 9 OS=Arabidopsis thaliana


Gene families : OG0000359 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000359_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01001827001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00001p00239750 OPCL1,... Phytohormones.jasmonic acid.synthesis.OPC-8:CoA synthetase 0.03 OrthoFinder output from all 47 species
Aop_g27234 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g30549 OPCL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Cba_g29974 OPCL1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g62425 OPCL1 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Dac_g07176 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g10656 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g20749 OPCL1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01011541001 No alias 4-coumarate--CoA ligase-like 6 OS=Arabidopsis thaliana 0.06 OrthoFinder output from all 47 species
Gb_19735 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os01g67540.1 LOC_Os01g67540 4-coumarate--CoA ligase-like 6 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Lfl_g23512 OPCL1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
MA_10432138g0010 OPCL1 4-coumarate--CoA ligase-like 5 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
MA_8552247g0010 No alias 4-coumarate--CoA ligase-like 7 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Msp_g20427 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Pir_g43795 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g10259 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051641 cellular localization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
InterPro domains Description Start Stop
IPR000873 AMP-dep_Synth/Lig_com 53 220
IPR000873 AMP-dep_Synth/Lig_com 221 411
IPR025110 AMP-bd_C 420 495
No external refs found!