No description available
Gene families : OG0000320 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000320_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01001911001 | |
| Cluster | HCCA: Cluster_75 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00092p00168980 | UBP25,... | Protein degradation.peptidase families.cysteine-type... | 0.03 | OrthoFinder output from all 47 species | |
| AT3G14400 | UBP25 | ubiquitin-specific protease 25 | 0.04 | OrthoFinder output from all 47 species | |
| AT4G24560 | UBP16 | ubiquitin-specific protease 16 | 0.03 | OrthoFinder output from all 47 species | |
| Adi_g060737 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Adi_g114935 | UBP23 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aev_g27664 | UBP25 | not classified & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aob_g15601 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cre14.g629300 | UBP23 | Protein degradation.peptidase families.cysteine-type... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g08414 | UBP25 | deubiquitinase *(UBP25) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g43480.1 | UBP25, LOC_Os05g43480 | deubiquitinase (UBP25) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g45877 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Lfl_g10823 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_10429414g0020 | UBP18 | deubiquitinase (UBP15-21) | 0.09 | OrthoFinder output from all 47 species | |
| MA_132593g0020 | UBP23 | Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis... | 0.04 | OrthoFinder output from all 47 species | |
| MA_53569g0010 | UBP23 | deubiquitinase (UBP23) | 0.04 | OrthoFinder output from all 47 species | |
| Mp3g16110.1 | UBP23 | deubiquitinase (UBP23) | 0.03 | OrthoFinder output from all 47 species | |
| Ore_g27850 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g20105 | UBP19 | deubiquitinase *(UBP15-21) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Sam_g50169 | No alias | deubiquitinase *(UBP15-21) & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Solyc08g069050.3.1 | UBP19, Solyc08g069050 | deubiquitinase (UBP15-21) | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g26124 | UBP23 | deubiquitinase *(UBP23) & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e024878_P003 | UBP15, Zm00001e024878 | deubiquitinase (UBP15-21) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0002097 | tRNA wobble base modification | IEP | HCCA |
| BP | GO:0002098 | tRNA wobble uridine modification | IEP | HCCA |
| BP | GO:0006396 | RNA processing | IEP | HCCA |
| BP | GO:0006399 | tRNA metabolic process | IEP | HCCA |
| BP | GO:0006400 | tRNA modification | IEP | HCCA |
| BP | GO:0006508 | proteolysis | IEP | HCCA |
| BP | GO:0008033 | tRNA processing | IEP | HCCA |
| BP | GO:0009451 | RNA modification | IEP | HCCA |
| BP | GO:0016579 | protein deubiquitination | IEP | HCCA |
| CC | GO:0033588 | elongator holoenzyme complex | IEP | HCCA |
| BP | GO:0034470 | ncRNA processing | IEP | HCCA |
| BP | GO:0034660 | ncRNA metabolic process | IEP | HCCA |
| BP | GO:0043170 | macromolecule metabolic process | IEP | HCCA |
| BP | GO:0043412 | macromolecule modification | IEP | HCCA |
| BP | GO:0070646 | protein modification by small protein removal | IEP | HCCA |
| BP | GO:0070647 | protein modification by small protein conjugation or removal | IEP | HCCA |
| CC | GO:0140535 | intracellular protein-containing complex | IEP | HCCA |
| CC | GO:1902494 | catalytic complex | IEP | HCCA |
No InterPro domains available for this sequence
| No external refs found! |
