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  5. GSVIVT01003548001

GSVIVT01003548001 (ASL1, LBD36)


Aliases : ASL1, LBD36

Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor


Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003548001
Cluster HCCA: Cluster_39

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00227160 LBD15, ASL11,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.05 OrthoFinder output from all 47 species
AMTR_s00032p00142260 LBD4,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
AMTR_s00076p00127530 LBD4,... RNA biosynthesis.transcriptional activation.AS2/LOB... 0.03 OrthoFinder output from all 47 species
AT2G28500 LBD11 LOB domain-containing protein 11 0.02 OrthoFinder output from all 47 species
AT5G06080 LBD33 LOB domain-containing protein 33 0.04 OrthoFinder output from all 47 species
AT5G63090 LOB Lateral organ boundaries (LOB) domain family protein 0.04 OrthoFinder output from all 47 species
Aev_g00680 AS2 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03506 LBD12, ASL5, PCK1 AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g33932 LBD15, ASL11 AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g13722 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g21173 LBD27, SCP AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25201.t1 LBD25, Aspi01Gene25201 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25203.t1 LBD25, Aspi01Gene25203 AS2/LOB-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.12G084800.1 LBD25, Ceric.12G084800 AS2/LOB-type transcription factor & original... 0.06 OrthoFinder output from all 47 species
Gb_19390 LBD4 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_21467 LBD22 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Gb_22180 LBD11 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Gb_38978 LBD15, ASL11 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os01g14030.1 LBD2, LOC_Os01g14030 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g14270.1 LBD18, LOC_Os03g14270 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Len_g35922 LOB AS2/LOB-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_136689g0010 LBD4 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
MA_16646g0010 LBD27, SCP transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
MA_962403g0010 LBD19 transcription factor (AS2/LOB) 0.02 OrthoFinder output from all 47 species
Ppi_g17986 LOB AS2/LOB-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014745 LBD4 AS2/LOB-type transcription factor & original... 0.02 OrthoFinder output from all 47 species
Solyc02g067800.4.1 LBD25, Solyc02g067800 transcription factor (AS2/LOB) 0.05 OrthoFinder output from all 47 species
Zm00001e016785_P005 LOB, Zm00001e016785 transcription factor (AS2/LOB) 0.04 OrthoFinder output from all 47 species
Zm00001e019686_P001 LBD20, Zm00001e019686 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species
Zm00001e038429_P001 LBD11, Zm00001e038429 transcription factor (AS2/LOB) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0043565 sequence-specific DNA binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
InterPro domains Description Start Stop
IPR004883 LOB 7 103
No external refs found!