Aliases : ATHB22, MEE68, ZHD2, HB22
Description : RNA biosynthesis.transcriptional activation.HB (Homeobox) superfamily.zf-HD transcription factor
Gene families : OG0000204 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000204_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00011p00255340 | AtHB31, ZHD4,... | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00038p00027320 | ATHB22, MEE68,... | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
| AMTR_s00070p00154800 | ATHB22, MEE68,... | RNA biosynthesis.transcriptional activation.HB... | 0.04 | OrthoFinder output from all 47 species | |
| AT1G14687 | AtHB32, HB32, ZHD14 | homeobox protein 32 | 0.05 | OrthoFinder output from all 47 species | |
| AT5G42780 | HB27, ZHD13, AtHB27 | homeobox protein 27 | 0.03 | OrthoFinder output from all 47 species | |
| Aop_g70061 | ATHB22, MEE68, ZHD2, HB22 | zf-HD-type transcription factor & original description: none | 0.07 | OrthoFinder output from all 47 species | |
| Aspi01Gene59294.t1 | ATHB22, MEE68,... | zf-HD-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene59294.t2 | ATHB22, MEE68,... | zf-HD-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Cba_g57687 | ATHB22, MEE68, ZHD2, HB22 | zf-HD-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.01G025400.1 | AtHB31, ZHD4,... | zf-HD-type transcription factor & original description:... | 0.02 | OrthoFinder output from all 47 species | |
| Ceric.20G036600.1 | AtHB31, ZHD4,... | zf-HD-type transcription factor & original description:... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.30G008700.1 | ATHB22, MEE68,... | zf-HD-type transcription factor & original description:... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01000250001 | No alias | RNA biosynthesis.transcriptional activation.HB... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_37393 | ATHB22, MEE68, ZHD2, HB22 | transcription factor (zf-HD) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os12g10630.1 | AtHB31, ZHD4,... | transcription factor (zf-HD) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g12417 | ATHB22, MEE68, ZHD2, HB22 | zf-HD-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Len_g14298 | ATHB22, MEE68, ZHD2, HB22 | zf-HD-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Lfl_g14735 | AtHB31, ZHD4, HB31 | zf-HD-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_19630g0030 | AtHB31, ZHD4, HB31 | transcription factor (zf-HD) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g11371 | ATHB22, MEE68, ZHD2, HB22 | zf-HD-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Nbi_g35218 | AtHB31, ZHD4, HB31 | zf-HD-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ppi_g00560 | ATHB22, MEE68, ZHD2, HB22 | zf-HD-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Solyc04g014260.2.1 | ATHB22, MEE68,... | transcription factor (zf-HD) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e008082_P001 | AtHB31, ZHD4,... | transcription factor (zf-HD) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e009830_P001 | HB34, ZHD9,... | transcription factor (zf-HD) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e015590_P001 | ATHB22, MEE68,... | transcription factor (zf-HD) | 0.07 | OrthoFinder output from all 47 species | |
| Zm00001e018364_P001 | ATHB22, MEE68,... | transcription factor (zf-HD) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e021292_P003 | AtHB31, ZHD4,... | transcription factor (zf-HD) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e022486_P001 | ATHB29, ZFHD1,... | transcription factor (zf-HD) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e023331_P001 | ATHB22, MEE68,... | transcription factor (zf-HD) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e034119_P001 | ATHB29, ZFHD1,... | transcription factor (zf-HD) | 0.05 | OrthoFinder output from all 47 species | |
| Zm00001e034407_P001 | ATHB22, MEE68,... | transcription factor (zf-HD) | 0.07 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0000786 | nucleosome | IEP | HCCA |
| CC | GO:0005634 | nucleus | IEP | HCCA |
| BP | GO:0006325 | chromatin organization | IEP | HCCA |
| BP | GO:0006334 | nucleosome assembly | IEP | HCCA |
| BP | GO:0006338 | chromatin remodeling | IEP | HCCA |
| BP | GO:0016043 | cellular component organization | IEP | HCCA |
| BP | GO:0022607 | cellular component assembly | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0032993 | protein-DNA complex | IEP | HCCA |
| BP | GO:0034728 | nucleosome organization | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| BP | GO:0043933 | protein-containing complex organization | IEP | HCCA |
| CC | GO:0044815 | DNA packaging complex | IEP | HCCA |
| MF | GO:0046983 | protein dimerization activity | IEP | HCCA |
| BP | GO:0065003 | protein-containing complex assembly | IEP | HCCA |
| BP | GO:0065004 | protein-DNA complex assembly | IEP | HCCA |
| BP | GO:0071824 | protein-DNA complex subunit organization | IEP | HCCA |
| BP | GO:0071840 | cellular component organization or biogenesis | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR006456 | ZF_HD_homeobox_Cys/His_dimer | 79 | 130 |
| No external refs found! |
