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  5. GSVIVT01003702001

GSVIVT01003702001


Description : Chromatin organisation.histone modifications.histone lysine methylation/demethylation.COMPASS histone trimethylation complex.WDR5 component


Gene families : OG0001739 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001739_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003702001
Cluster HCCA: Cluster_15

Target Alias Description ECC score Gene Family Method Actions
Adi_g088773 No alias substrate adaptor *(DHU1) of CUL4-based ubiquitin ligase... 0.02 OrthoFinder output from all 47 species
Cre08.g367650 No alias Chromatin organisation.histone modifications.histone... 0.02 OrthoFinder output from all 47 species
Gb_16393 No alias component WDR5 of COMPASS histone trimethylation complex 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003712 transcription coregulator activity IEP HCCA
BP GO:0006357 regulation of transcription by RNA polymerase II IEP HCCA
BP GO:0006396 RNA processing IEP HCCA
CC GO:0016592 mediator complex IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR001680 WD40_repeat 139 177
IPR001680 WD40_repeat 98 135
IPR001680 WD40_repeat 182 220
IPR001680 WD40_repeat 57 93
IPR001680 WD40_repeat 270 308
IPR001680 WD40_repeat 224 264
IPR001680 WD40_repeat 14 49
No external refs found!