1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01003836001

GSVIVT01003836001 (SPL12)


Aliases : SPL12

Description : RNA biosynthesis.transcriptional activation.SBP transcription factor


Gene families : OG0000121 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000121_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01003836001
Cluster HCCA: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00198330 AtSPL9, SPL9,... RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
AMTR_s00062p00211520 SPL4,... RNA biosynthesis.transcriptional activation.SBP... 0.03 OrthoFinder output from all 47 species
AT5G50570 SPL13, SPL13A Squamosa promoter-binding protein-like (SBP domain)... 0.05 OrthoFinder output from all 47 species
AT5G50670 SPL13, SPL13B Squamosa promoter-binding protein-like (SBP domain)... 0.05 OrthoFinder output from all 47 species
Aev_g07305 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g08078 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g19260 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g10909 SPL8 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Ala_g38390 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g04360 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g08975 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Als_g31920 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46708 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g62118 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g14528 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g08296 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene14484.t1 SPL3, Aspi01Gene14484 SBP-type transcription factor & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene23632.t1 SPL8, Aspi01Gene23632 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene27771.t1 SPL2, Aspi01Gene27771 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27773.t1 SPL3, Aspi01Gene27773 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene33252.t1 SPL8, Aspi01Gene33252 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene61092.t1 SPL8, Aspi01Gene61092 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g10833 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g26158 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G099600.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.12G034000.1 SPL13, SPL13A,... SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Dac_g24764 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g07628 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13667 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g23320 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g05026 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g15224 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g25686 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g31810 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01033519001 AtSPL9, SPL9 RNA biosynthesis.transcriptional activation.SBP... 0.04 OrthoFinder output from all 47 species
Gb_26599 SPL10 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
LOC_Os02g04680.1 SPL2, LOC_Os02g04680 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Len_g03838 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Len_g48733 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g17821 SPL3 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_47367g0010 SPL8 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
MA_92489g0010 SPL2 transcription factor (SBP) 0.02 OrthoFinder output from all 47 species
Mp1g10020.1 SPL8 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Mp1g10030.1 SPL2 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
Msp_g03985 SPL2 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g06307 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g13816 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g37562 SPL8 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g43554 SPL8 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g15680 SPL8 SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30310 No alias SBP-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g23606 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g22224 SPL2 SBP-type transcription factor & original description: none 0.04 OrthoFinder output from all 47 species
Sacu_v1.1_s0067.g016308 SPL3 SBP-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Sam_g48834 No alias SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Solyc02g077920.4.1 SPL3, Solyc02g077920 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Solyc10g018780.3.1 SPL8, Solyc10g018780 transcription factor (SBP) 0.05 OrthoFinder output from all 47 species
Tin_g32347 SPL2 SBP-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e013795_P002 SPL8, Zm00001e013795 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species
Zm00001e025234_P001 SPL2, Zm00001e025234 transcription factor (SBP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
CC GO:0005634 nucleus IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0004674 protein serine/threonine kinase activity IEP HCCA
BP GO:0006855 xenobiotic transmembrane transport IEP HCCA
MF GO:0015291 secondary active transmembrane transporter activity IEP HCCA
MF GO:0015297 antiporter activity IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0042908 xenobiotic transport IEP HCCA
MF GO:0043531 ADP binding IEP HCCA
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR004333 SBP_dom 85 158
No external refs found!