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  5. GSVIVT01004939001

GSVIVT01004939001 (RARE1)


Aliases : RARE1

Description : RNA processing.organelle machineries.RNA editing.plastidial RNA editing.RARE1 RNA editing factor


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01004939001
Cluster HCCA: Cluster_105

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00003p00175270 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g31790... 0.05 OrthoFinder output from all 47 species
AMTR_s00003p00263110 No alias Pentatricopeptide repeat-containing protein At1g03540... 0.03 OrthoFinder output from all 47 species
AMTR_s00010p00262470 OTP85 Pentatricopeptide repeat-containing protein At2g02980,... 0.03 OrthoFinder output from all 47 species
AMTR_s00011p00233950 No alias Pentatricopeptide repeat-containing protein At4g37170... 0.03 OrthoFinder output from all 47 species
AMTR_s00011p00266560 evm_27.TU.AmTr_v1... RNA processing.organelle machineries.RNA... 0.03 OrthoFinder output from all 47 species
AMTR_s00012p00252800 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g39530... 0.05 OrthoFinder output from all 47 species
AMTR_s00016p00242080 CRR28,... Pentatricopeptide repeat-containing protein At1g59720,... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00204910 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g19191,... 0.05 OrthoFinder output from all 47 species
AMTR_s00029p00235510 OTP84,... Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
AMTR_s00129p00082590 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At1g19720... 0.04 OrthoFinder output from all 47 species
AMTR_s00155p00018120 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21300... 0.04 OrthoFinder output from all 47 species
AT1G06140 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.07 OrthoFinder output from all 47 species
AT1G11290 CRR22 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G15510 VAC1, ECB2, ATECB2 Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G31010 OSB4 organellar single-stranded DNA binding protein 4 0.02 OrthoFinder output from all 47 species
AT1G53600 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT2G27610 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT2G33680 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G39620 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.02 OrthoFinder output from all 47 species
AT2G40720 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT2G41080 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.06 OrthoFinder output from all 47 species
AT3G01580 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G08820 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G13770 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G14730 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.05 OrthoFinder output from all 47 species
AT3G15930 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G26782 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT3G49142 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT3G63370 OTP86 Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G13650 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.09 OrthoFinder output from all 47 species
AT4G16835 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G21300 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.03 OrthoFinder output from all 47 species
AT4G33170 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT4G33990 EMB2758 Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G39952 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G03800 emb1899, EMB175, EMB166 Pentatricopeptide repeat (PPR) superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G08490 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G37570 No alias Pentatricopeptide repeat (PPR-like) superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G46460 No alias Pentatricopeptide repeat (PPR) superfamily protein 0.06 OrthoFinder output from all 47 species
Aev_g17868 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g23888 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g36018 PTAC9, OSB2 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g24374 MEF19 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g36534 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g30646 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g04389 LPA66 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g16842 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g21628 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g33229 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67889 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g68032 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0001.g000793 No alias not classified & original description: CDS=1-2415 0.05 OrthoFinder output from all 47 species
Azfi_s0069.g036581 No alias not classified & original description: CDS=1-1653 0.04 OrthoFinder output from all 47 species
Cba_g77978 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.06G079700.1 CRR22, Ceric.06G079700 not classified & original description: pacid=50619673... 0.04 OrthoFinder output from all 47 species
Ceric.16G024400.1 Ceric.16G024400 not classified & original description: pacid=50589838... 0.03 OrthoFinder output from all 47 species
Ceric.23G032000.1 Ceric.23G032000 not classified & original description: pacid=50611416... 0.04 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000851.30 No alias Pentatricopeptide repeat-containing protein At5g61990,... 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00001038.5 No alias No description available 0.01 OrthoFinder output from all 47 species
Dcu_g07608 CRR22 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07622 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g08479 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g13254 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g25892 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g28005 CRR2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g43173 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47804 MEF21 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g48764 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01035491001 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
Gb_00194 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_00409 No alias RNA editing factor (SLO2) 0.04 OrthoFinder output from all 47 species
Gb_02065 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_02375 CRR22 RNA editing factor (MEF19) 0.04 OrthoFinder output from all 47 species
Gb_02379 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
Gb_04381 No alias Pentatricopeptide repeat-containing protein DOT4,... 0.08 OrthoFinder output from all 47 species
Gb_04428 VAC1, ECB2, ATECB2 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
Gb_04616 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_05939 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_06576 OTP84 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Gb_07442 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.06 OrthoFinder output from all 47 species
Gb_07638 OTP84 Pentatricopeptide repeat-containing protein At4g21300... 0.05 OrthoFinder output from all 47 species
Gb_08671 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_08745 CRR22 RNA editing factor (OTP82) 0.06 OrthoFinder output from all 47 species
Gb_09654 No alias RNA editing factor (MEF13) 0.05 OrthoFinder output from all 47 species
Gb_10113 No alias Pentatricopeptide repeat-containing protein At1g25360... 0.04 OrthoFinder output from all 47 species
Gb_10158 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_10908 No alias Putative pentatricopeptide repeat-containing protein... 0.08 OrthoFinder output from all 47 species
Gb_11905 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_12372 CRR22 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_14445 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_15476 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.05 OrthoFinder output from all 47 species
Gb_15666 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Gb_16017 CRR22 RNA editing factor (MEF19) 0.1 OrthoFinder output from all 47 species
Gb_16848 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_16955 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
Gb_17734 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Gb_18359 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
Gb_19828 No alias RNA editing factor (OTP82) 0.07 OrthoFinder output from all 47 species
Gb_19924 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
Gb_20266 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_21056 CRR22 RNA editing factor (OTP82) 0.05 OrthoFinder output from all 47 species
Gb_21443 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.05 OrthoFinder output from all 47 species
Gb_23605 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
Gb_23671 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
Gb_24755 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_24816 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Gb_25283 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_26311 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Gb_26696 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_27521 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.07 OrthoFinder output from all 47 species
Gb_28279 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
Gb_28612 LOI1, MEF11 RNA editing factor (MEF11) 0.05 OrthoFinder output from all 47 species
Gb_28780 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_29028 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Gb_29868 CRR22 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_29877 CRR22 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_29879 CRR22 RNA editing factor (MEF19). RNA editing factor (OTP82) 0.05 OrthoFinder output from all 47 species
Gb_32051 REME1 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_32439 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
Gb_32447 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.07 OrthoFinder output from all 47 species
Gb_32452 No alias Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
Gb_32456 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Gb_33070 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.04 OrthoFinder output from all 47 species
Gb_33117 No alias Pentatricopeptide repeat-containing protein At2g22070... 0.06 OrthoFinder output from all 47 species
Gb_33311 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
Gb_33693 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
Gb_33726 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.08 OrthoFinder output from all 47 species
Gb_34299 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.06 OrthoFinder output from all 47 species
Gb_35395 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.08 OrthoFinder output from all 47 species
Gb_36398 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
Gb_36806 EMB2261 Pentatricopeptide repeat-containing protein At2g27610... 0.03 OrthoFinder output from all 47 species
Gb_36839 OTP84 Pentatricopeptide repeat-containing protein At4g13650... 0.08 OrthoFinder output from all 47 species
Gb_37102 OTP84 RNA editing factor (MEF19) 0.06 OrthoFinder output from all 47 species
Gb_37176 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
Gb_37624 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
Gb_38068 OTP86 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Gb_38158 CRR2 OTP70 plastidial RNA splicing factor 0.04 OrthoFinder output from all 47 species
Gb_38249 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Gb_40303 No alias Pentatricopeptide repeat-containing protein At3g24000,... 0.05 OrthoFinder output from all 47 species
Gb_40380 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Gb_41317 No alias Pentatricopeptide repeat-containing protein At3g12770... 0.05 OrthoFinder output from all 47 species
LOC_Os01g01115.1 LOC_Os01g01115 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os01g27650.1 LOC_Os01g27650 Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
LOC_Os01g40720.1 LOC_Os01g40720 RNA editing factor (MEF7) 0.05 OrthoFinder output from all 47 species
LOC_Os01g60250.1 LOC_Os01g60250 Pentatricopeptide repeat-containing protein At3g14730... 0.06 OrthoFinder output from all 47 species
LOC_Os01g60430.1 LOC_Os01g60430 RNA editing factor (MEF10) 0.06 OrthoFinder output from all 47 species
LOC_Os01g62910.1 CRR2, LOC_Os01g62910 Pentatricopeptide repeat-containing protein At3g46790,... 0.03 OrthoFinder output from all 47 species
LOC_Os01g68490.1 MEF21, LOC_Os01g68490 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
LOC_Os03g08680.1 LOC_Os03g08680 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
LOC_Os03g13230.1 LOC_Os03g13230 Pentatricopeptide repeat-containing protein At4g37170... 0.03 OrthoFinder output from all 47 species
LOC_Os03g44210.2 LOC_Os03g44210 RNA editing factor (SEL1/PDM1) 0.03 OrthoFinder output from all 47 species
LOC_Os03g56850.1 LOC_Os03g56850 Pentatricopeptide repeat-containing protein At4g21300... 0.08 OrthoFinder output from all 47 species
LOC_Os03g63260.3 LOC_Os03g63260 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os03g63510.1 LOC_Os03g63510 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
LOC_Os05g49740.1 EMB2744, LOC_Os05g49740 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
LOC_Os06g12510.1 LOC_Os06g12510 Pentatricopeptide repeat-containing protein At5g15300... 0.04 OrthoFinder output from all 47 species
LOC_Os06g40860.1 LOC_Os06g40860 Pentatricopeptide repeat-containing protein At1g03540... 0.05 OrthoFinder output from all 47 species
LOC_Os06g49185.1 LOC_Os06g49185 Pentatricopeptide repeat-containing protein At3g03580... 0.04 OrthoFinder output from all 47 species
LOC_Os07g10400.1 CRR22, LOC_Os07g10400 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
LOC_Os07g47370.1 LOC_Os07g47370 Pentatricopeptide repeat-containing protein At4g32430,... 0.06 OrthoFinder output from all 47 species
LOC_Os08g04400.1 LOC_Os08g04400 Pentatricopeptide repeat-containing protein At5g50390,... 0.05 OrthoFinder output from all 47 species
LOC_Os08g25280.1 LOC_Os08g25280 Pentatricopeptide repeat-containing protein At4g39530... 0.03 OrthoFinder output from all 47 species
LOC_Os08g33700.1 LOC_Os08g33700 Pentatricopeptide repeat-containing protein At3g47530... 0.03 OrthoFinder output from all 47 species
LOC_Os09g24640.1 REME1, LOC_Os09g24640 Pentatricopeptide repeat-containing protein At2g36730... 0.03 OrthoFinder output from all 47 species
LOC_Os12g06650.1 LOC_Os12g06650 Pentatricopeptide repeat-containing protein At4g15720... 0.04 OrthoFinder output from all 47 species
Len_g03634 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Len_g16975 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g18962 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g26584 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g33522 OTP84 ssDNA-binding protein *(OSB) & original description: none 0.05 OrthoFinder output from all 47 species
Len_g44806 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g24382 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10138132g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.03 OrthoFinder output from all 47 species
MA_10214098g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
MA_10429371g0010 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.04 OrthoFinder output from all 47 species
MA_10429837g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_108139g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_110266g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_111990g0010 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_112594g0010 OTP84 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
MA_112849g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.04 OrthoFinder output from all 47 species
MA_114722g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_11517g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_11765g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_122546g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_13022g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
MA_130735g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_131437g0010 No alias RNA editing factor (MEF3) 0.05 OrthoFinder output from all 47 species
MA_138190g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.03 OrthoFinder output from all 47 species
MA_141034g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.05 OrthoFinder output from all 47 species
MA_14381g0010 EMB2758 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_14938g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.05 OrthoFinder output from all 47 species
MA_16226g0010 OTP86 Pentatricopeptide repeat-containing protein At3g63370,... 0.03 OrthoFinder output from all 47 species
MA_1673g0010 No alias Pentatricopeptide repeat-containing protein At1g19720... 0.03 OrthoFinder output from all 47 species
MA_174226g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
MA_175688g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
MA_18165g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_184104g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
MA_189553g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
MA_20585g0020 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_20899g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.06 OrthoFinder output from all 47 species
MA_211508g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
MA_22485g0010 CRR2 Pentatricopeptide repeat-containing protein At3g46790,... 0.02 OrthoFinder output from all 47 species
MA_230261g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.06 OrthoFinder output from all 47 species
MA_2473g0010 CRR22 Pentatricopeptide repeat-containing protein At3g12770... 0.03 OrthoFinder output from all 47 species
MA_25584g0010 DOT4 Pentatricopeptide repeat-containing protein DOT4,... 0.03 OrthoFinder output from all 47 species
MA_25729g0010 REME1 Pentatricopeptide repeat-containing protein At3g24000,... 0.05 OrthoFinder output from all 47 species
MA_30632g0020 CRR22 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_3317g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_34492g0010 No alias Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
MA_3449g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_356g0010 No alias Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
MA_38395g0010 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_388061g0020 REME1 Pentatricopeptide repeat-containing protein At2g03880,... 0.05 OrthoFinder output from all 47 species
MA_412g0010 REME1 Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
MA_4503g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_50118g0010 CRR22 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_52613g0020 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
MA_53781g0010 No alias Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
MA_56660g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
MA_63139g0020 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.04 OrthoFinder output from all 47 species
MA_6329g0010 No alias Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
MA_6527g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
MA_656915g0010 CRR22 Pentatricopeptide repeat-containing protein DOT4,... 0.04 OrthoFinder output from all 47 species
MA_683665g0010 No alias Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
MA_68707g0010 No alias RNA editing factor (MEF1) 0.03 OrthoFinder output from all 47 species
MA_68933g0010 CRR22 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
MA_73205g0010 CRR22 Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
MA_73895g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_75255g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_7691g0010 CRR22 Pentatricopeptide repeat-containing protein At2g22070... 0.03 OrthoFinder output from all 47 species
MA_778985g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.04 OrthoFinder output from all 47 species
MA_812716g0010 EMB2758 Pentatricopeptide repeat-containing protein At2g22070... 0.04 OrthoFinder output from all 47 species
MA_81436g0010 OTP84 Pentatricopeptide repeat-containing protein At4g21300... 0.03 OrthoFinder output from all 47 species
MA_8210920g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.03 OrthoFinder output from all 47 species
MA_8868720g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.03 OrthoFinder output from all 47 species
MA_905781g0010 No alias Pentatricopeptide repeat-containing protein At1g20230... 0.03 OrthoFinder output from all 47 species
MA_916566g0010 OTP82 Pentatricopeptide repeat-containing protein At4g02750... 0.06 OrthoFinder output from all 47 species
MA_9463538g0010 No alias Pentatricopeptide repeat-containing protein At4g33170... 0.04 OrthoFinder output from all 47 species
MA_956160g0010 No alias Pentatricopeptide repeat-containing protein At3g02330,... 0.04 OrthoFinder output from all 47 species
MA_957690g0010 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.05 OrthoFinder output from all 47 species
MA_961981g0010 No alias Pentatricopeptide repeat-containing protein At2g27610... 0.07 OrthoFinder output from all 47 species
Msp_g40827 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g21976 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g15475 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g15488 OTP84 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g12011 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g46657 No alias ssDNA-binding protein *(OSB) & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g53979 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007447 No alias not classified & original description: CDS=108-3026 0.02 OrthoFinder output from all 47 species
Sam_g13514 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g26571 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27934 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo21427 No alias Pentatricopeptide repeat-containing protein At2g13600... 0.04 OrthoFinder output from all 47 species
Smo81196 CRR22 Pentatricopeptide repeat-containing protein At1g11290,... 0.04 OrthoFinder output from all 47 species
Solyc01g006920.4.1 Solyc01g006920 Pentatricopeptide repeat-containing protein At4g39530... 0.04 OrthoFinder output from all 47 species
Solyc01g081560.2.1 Solyc01g081560 Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Solyc01g090510.2.1 Solyc01g090510 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc01g097670.4.1 EMB2261, Solyc01g097670 RNA editing factor (ECD1) 0.09 OrthoFinder output from all 47 species
Solyc01g099000.1.1 Solyc01g099000 Pentatricopeptide repeat-containing protein At3g05340... 0.03 OrthoFinder output from all 47 species
Solyc02g005280.1.1 Solyc02g005280 Pentatricopeptide repeat-containing protein At1g50270... 0.09 OrthoFinder output from all 47 species
Solyc02g065030.1.1 EMB2758, Solyc02g065030 Pentatricopeptide repeat-containing protein DOT4,... 0.08 OrthoFinder output from all 47 species
Solyc02g065560.1.1 Solyc02g065560 Pentatricopeptide repeat-containing protein At2g33680... 0.03 OrthoFinder output from all 47 species
Solyc02g068630.1.1 Solyc02g068630 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc02g076700.1.1 Solyc02g076700 Pentatricopeptide repeat-containing protein At4g02750... 0.03 OrthoFinder output from all 47 species
Solyc02g079260.2.1 Solyc02g079260 Pentatricopeptide repeat-containing protein At4g13650... 0.05 OrthoFinder output from all 47 species
Solyc02g088650.1.1 Solyc02g088650 Pentatricopeptide repeat-containing protein At5g39350... 0.04 OrthoFinder output from all 47 species
Solyc02g093380.1.1 Solyc02g093380 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc03g006990.1.1 Solyc03g006990 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Solyc03g007840.1.1 Solyc03g007840 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc03g093630.3.1 CRR2, Solyc03g093630 Pentatricopeptide repeat-containing protein At2g27610... 0.05 OrthoFinder output from all 47 species
Solyc03g097850.1.1 Solyc03g097850 Pentatricopeptide repeat-containing protein At5g16860... 0.04 OrthoFinder output from all 47 species
Solyc03g098420.3.1 Solyc03g098420 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Solyc03g111210.4.1 Solyc03g111210 RNA editing factor (OTP80) 0.07 OrthoFinder output from all 47 species
Solyc03g114660.1.1 Solyc03g114660 Pentatricopeptide repeat-containing protein At1g18485... 0.03 OrthoFinder output from all 47 species
Solyc03g115790.1.1 CRR28, Solyc03g115790 Pentatricopeptide repeat-containing protein At5g66520... 0.03 OrthoFinder output from all 47 species
Solyc03g116000.1.1 Solyc03g116000 Pentatricopeptide repeat-containing protein At3g47530... 0.08 OrthoFinder output from all 47 species
Solyc03g119120.3.1 Solyc03g119120 Pentatricopeptide repeat-containing protein At4g02750... 0.04 OrthoFinder output from all 47 species
Solyc03g119950.1.1 VAC1, ECB2,... RNA editing factor (ECB2/VAC1) 0.07 OrthoFinder output from all 47 species
Solyc04g009000.1.1 Solyc04g009000 RNA editing factor (SLO2) 0.05 OrthoFinder output from all 47 species
Solyc04g016540.2.1 Solyc04g016540 Pentatricopeptide repeat-containing protein At2g39620... 0.04 OrthoFinder output from all 47 species
Solyc04g051480.1.1 OTP84, Solyc04g051480 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Solyc04g063300.3.1 Solyc04g063300 Pentatricopeptide repeat-containing protein At3g26540... 0.06 OrthoFinder output from all 47 species
Solyc05g009400.3.1 Solyc05g009400 Pentatricopeptide repeat-containing protein At3g29230... 0.04 OrthoFinder output from all 47 species
Solyc05g012630.2.1 Solyc05g012630 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc05g013200.1.1 OTP85, Solyc05g013200 RNA editing factor (OTP85) 0.03 OrthoFinder output from all 47 species
Solyc06g009500.1.1 Solyc06g009500 Pentatricopeptide repeat-containing protein At2g13600... 0.07 OrthoFinder output from all 47 species
Solyc06g062610.2.1 Solyc06g062610 Putative pentatricopeptide repeat-containing protein... 0.06 OrthoFinder output from all 47 species
Solyc06g066080.1.1 OTP85, Solyc06g066080 Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Solyc06g068810.4.1 Solyc06g068810 Pentatricopeptide repeat-containing protein At5g50990... 0.06 OrthoFinder output from all 47 species
Solyc06g069700.4.1 Solyc06g069700 Pentatricopeptide repeat-containing protein At5g61400... 0.06 OrthoFinder output from all 47 species
Solyc06g084580.1.1 Solyc06g084580 Pentatricopeptide repeat-containing protein At4g20770... 0.06 OrthoFinder output from all 47 species
Solyc07g053520.2.1 SLO1, Solyc07g053520 Putative pentatricopeptide repeat-containing protein... 0.04 OrthoFinder output from all 47 species
Solyc07g055310.1.1 Solyc07g055310 Pentatricopeptide repeat-containing protein At2g41080... 0.03 OrthoFinder output from all 47 species
Solyc07g062820.1.1 Solyc07g062820 RNA editing factor (SEL1/PDM1) 0.05 OrthoFinder output from all 47 species
Solyc07g065730.1.1 Solyc07g065730 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Solyc08g023640.1.1 Solyc08g023640 Pentatricopeptide repeat-containing protein At4g21065... 0.04 OrthoFinder output from all 47 species
Solyc09g007040.1.1 Solyc09g007040 Pentatricopeptide repeat-containing protein At3g53360,... 0.03 OrthoFinder output from all 47 species
Solyc09g007430.1.1 PTAC9, OSB2,... ssDNA-binding protein (OSB). TAC9 cofactor of... 0.04 OrthoFinder output from all 47 species
Solyc09g059575.1.1 Solyc09g059575 Putative pentatricopeptide repeat-containing protein... 0.05 OrthoFinder output from all 47 species
Solyc09g065840.3.1 OSB1, Solyc09g065840 ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Solyc09g075170.1.1 Solyc09g075170 Pentatricopeptide repeat-containing protein At3g62890... 0.06 OrthoFinder output from all 47 species
Solyc09g082170.4.1 Solyc09g082170 Pentatricopeptide repeat-containing protein At4g14820... 0.09 OrthoFinder output from all 47 species
Solyc09g082450.1.1 Solyc09g082450 RNA editing factor (YS1) 0.07 OrthoFinder output from all 47 species
Solyc11g005970.1.1 Solyc11g005970 Pentatricopeptide repeat-containing protein At3g24000,... 0.03 OrthoFinder output from all 47 species
Solyc11g007230.1.1 Solyc11g007230 Pentatricopeptide repeat-containing protein At3g53360,... 0.06 OrthoFinder output from all 47 species
Solyc11g008940.1.1 CRR2, Solyc11g008940 Pentatricopeptide repeat-containing protein At3g46790,... 0.14 OrthoFinder output from all 47 species
Solyc11g008970.1.1 Solyc11g008970 Pentatricopeptide repeat-containing protein At4g39952,... 0.07 OrthoFinder output from all 47 species
Solyc11g017290.1.1 Solyc11g017290 Pentatricopeptide repeat-containing protein At1g31430... 0.06 OrthoFinder output from all 47 species
Solyc11g065250.1.1 EMB2744, Solyc11g065250 Pentatricopeptide repeat-containing protein At5g39680... 0.03 OrthoFinder output from all 47 species
Solyc11g067210.1.1 Solyc11g067210 Pentatricopeptide repeat-containing protein At2g27610... 0.06 OrthoFinder output from all 47 species
Solyc11g071370.1.1 PDE247, CLB19,... RNA editing factor (CLB19) 0.03 OrthoFinder output from all 47 species
Solyc12g006575.1.1 OTP82, Solyc12g006575 RNA editing factor (OTP82) 0.04 OrthoFinder output from all 47 species
Solyc12g042400.1.1 SLO1, Solyc12g042400 Pentatricopeptide repeat-containing protein At2g29760,... 0.04 OrthoFinder output from all 47 species
Solyc12g096510.3.1 Solyc12g096510 Pentatricopeptide repeat-containing protein At5g66520... 0.04 OrthoFinder output from all 47 species
Zm00001e001200_P001 Zm00001e001200 Pentatricopeptide repeat-containing protein At5g59600... 0.06 OrthoFinder output from all 47 species
Zm00001e001918_P001 EMB2758, Zm00001e001918 Pentatricopeptide repeat-containing protein At4g33990... 0.06 OrthoFinder output from all 47 species
Zm00001e010837_P001 LPA66, Zm00001e010837 Pentatricopeptide repeat-containing protein At5g48910... 0.03 OrthoFinder output from all 47 species
Zm00001e015358_P001 Zm00001e015358 Pentatricopeptide repeat-containing protein At5g39350... 0.03 OrthoFinder output from all 47 species
Zm00001e018565_P001 Zm00001e018565 Pentatricopeptide repeat-containing protein At3g13880... 0.03 OrthoFinder output from all 47 species
Zm00001e021453_P001 CRR28, Zm00001e021453 Pentatricopeptide repeat-containing protein At5g06540... 0.04 OrthoFinder output from all 47 species
Zm00001e023504_P001 CRR22, Zm00001e023504 Pentatricopeptide repeat-containing protein At1g11290,... 0.07 OrthoFinder output from all 47 species
Zm00001e023800_P003 PDE247, CLB19,... RNA editing factor (CLB19) 0.03 OrthoFinder output from all 47 species
Zm00001e025557_P001 Zm00001e025557 Pentatricopeptide repeat-containing protein At5g56310... 0.05 OrthoFinder output from all 47 species
Zm00001e029119_P001 Zm00001e029119 Pentatricopeptide repeat-containing protein At2g33760... 0.03 OrthoFinder output from all 47 species
Zm00001e031660_P001 Zm00001e031660 Pentatricopeptide repeat-containing protein At4g14170... 0.07 OrthoFinder output from all 47 species
Zm00001e033171_P001 Zm00001e033171 Pentatricopeptide repeat-containing protein At2g22070... 0.05 OrthoFinder output from all 47 species
Zm00001e034478_P001 Zm00001e034478 Pentatricopeptide repeat-containing protein At3g24000,... 0.04 OrthoFinder output from all 47 species
Zm00001e035654_P001 EMB2758, Zm00001e035654 Pentatricopeptide repeat-containing protein At4g33990... 0.05 OrthoFinder output from all 47 species
Zm00001e035817_P001 Zm00001e035817 Pentatricopeptide repeat-containing protein At4g32430,... 0.03 OrthoFinder output from all 47 species
Zm00001e036301_P001 Zm00001e036301 Pentatricopeptide repeat-containing protein At4g30700... 0.04 OrthoFinder output from all 47 species
Zm00001e037600_P001 Zm00001e037600 Putative pentatricopeptide repeat-containing protein... 0.03 OrthoFinder output from all 47 species
Zm00001e038919_P001 Zm00001e038919 Pentatricopeptide repeat-containing protein At5g15300... 0.04 OrthoFinder output from all 47 species
Zm00001e039394_P003 Zm00001e039394 Pentatricopeptide repeat-containing protein At5g04780,... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 530 553
IPR002885 Pentatricopeptide_repeat 61 80
IPR032867 DYW_dom 629 752
IPR002885 Pentatricopeptide_repeat 454 502
IPR002885 Pentatricopeptide_repeat 353 401
IPR002885 Pentatricopeptide_repeat 151 198
IPR002885 Pentatricopeptide_repeat 253 300
No external refs found!