Aliases : YCF5
Description : Photosynthesis.photophosphorylation.cytochrome b6/f complex.assembly.CCS cytochrome f/c6 maturation system (system II).CcsA component
Gene families : OG0008998 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0008998_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | HRR: GSVIVT01004975001 | |
| Cluster | HCCA: Cluster_27 |
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| ATCG01040 | YCF5 | Cytochrome C assembly protein | 0.11 | OrthoFinder output from all 47 species | |
| Aev_g47212 | YCF5 | assembly factor CcsA of CCS cytochrome f/c6 maturation... | 0.11 | OrthoFinder output from all 47 species | |
| Aob_g08809 | YCF5 | assembly factor CcsA of CCS cytochrome f/c6 maturation... | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g78789 | YCF5 | assembly factor CcsA of CCS cytochrome f/c6 maturation... | 0.06 | OrthoFinder output from all 47 species | |
| Ceric.01G044100.1 | YCF5, Ceric.01G044100 | assembly factor CcsA of CCS cytochrome f/c6 maturation... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.05G043800.1 | YCF5, Ceric.05G043800 | assembly factor CcsA of CCS cytochrome f/c6 maturation... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.05G046400.1 | YCF5, Ceric.05G046400 | assembly factor CcsA of CCS cytochrome f/c6 maturation... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.18G053700.1 | YCF5, Ceric.18G053700 | assembly factor CcsA of CCS cytochrome f/c6 maturation... | 0.1 | OrthoFinder output from all 47 species | |
| Ceric.19G029400.1 | YCF5, Ceric.19G029400 | assembly factor CcsA of CCS cytochrome f/c6 maturation... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.35G068700.1 | YCF5, Ceric.35G068700 | assembly factor CcsA of CCS cytochrome f/c6 maturation... | 0.03 | OrthoFinder output from all 47 species | |
| Ceric.39G055700.1 | YCF5, Ceric.39G055700 | assembly factor CcsA of CCS cytochrome f/c6 maturation... | 0.03 | OrthoFinder output from all 47 species | |
| Gb_33050 | YCF5 | assembly factor CcsA of CCS cytochrome f/c6 maturation... | 0.11 | OrthoFinder output from all 47 species | |
| LOC_Os06g46434.1 | YCF5, LOC_Os06g46434 | assembly factor CcsA of CCS cytochrome f/c6 maturation... | 0.12 | OrthoFinder output from all 47 species | |
| Lfl_g37809 | YCF5 | assembly factor CcsA of CCS cytochrome f/c6 maturation... | 0.07 | OrthoFinder output from all 47 species | |
| Solyc00g500194.1.1 | YCF5, Solyc00g500194 | Cytochrome c biogenesis protein CcsA OS=Solanum... | 0.1 | OrthoFinder output from all 47 species | |
| Solyc08g022180.1.1 | YCF5, Solyc08g022180 | assembly factor CcsA of CCS cytochrome f/c6 maturation... | 0.1 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| BP | GO:0017004 | cytochrome complex assembly | IEA | Interproscan |
| MF | GO:0020037 | heme binding | IEA | Interproscan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| CC | GO:0005575 | cellular_component | IEP | HCCA |
| CC | GO:0005739 | mitochondrion | IEP | HCCA |
| BP | GO:0006164 | purine nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0006754 | ATP biosynthetic process | IEP | HCCA |
| BP | GO:0009142 | nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009145 | purine nucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009152 | purine ribonucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009165 | nucleotide biosynthetic process | IEP | HCCA |
| BP | GO:0009201 | ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009206 | purine ribonucleoside triphosphate biosynthetic process | IEP | HCCA |
| BP | GO:0009260 | ribonucleotide biosynthetic process | IEP | HCCA |
| CC | GO:0009521 | photosystem | IEP | HCCA |
| CC | GO:0009522 | photosystem I | IEP | HCCA |
| CC | GO:0009523 | photosystem II | IEP | HCCA |
| CC | GO:0009579 | thylakoid | IEP | HCCA |
| BP | GO:0009767 | photosynthetic electron transport chain | IEP | HCCA |
| BP | GO:0009772 | photosynthetic electron transport in photosystem II | IEP | HCCA |
| MF | GO:0015002 | obsolete heme-copper terminal oxidase activity | IEP | HCCA |
| BP | GO:0015979 | photosynthesis | IEP | HCCA |
| BP | GO:0015986 | proton motive force-driven ATP synthesis | IEP | HCCA |
| MF | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | IEP | HCCA |
| BP | GO:0019684 | photosynthesis, light reaction | IEP | HCCA |
| BP | GO:0022900 | electron transport chain | IEP | HCCA |
| CC | GO:0032991 | protein-containing complex | IEP | HCCA |
| CC | GO:0043226 | organelle | IEP | HCCA |
| CC | GO:0043227 | membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043228 | non-membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043229 | intracellular organelle | IEP | HCCA |
| CC | GO:0043231 | intracellular membrane-bounded organelle | IEP | HCCA |
| CC | GO:0043232 | intracellular non-membrane-bounded organelle | IEP | HCCA |
| MF | GO:0045156 | electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity | IEP | HCCA |
| BP | GO:0046390 | ribose phosphate biosynthetic process | IEP | HCCA |
| MF | GO:0048038 | quinone binding | IEP | HCCA |
| MF | GO:0051287 | NAD binding | IEP | HCCA |
| BP | GO:0072522 | purine-containing compound biosynthetic process | IEP | HCCA |
| CC | GO:0098796 | membrane protein complex | IEP | HCCA |
| CC | GO:0110165 | cellular anatomical entity | IEP | HCCA |
| BP | GO:1901137 | carbohydrate derivative biosynthetic process | IEP | HCCA |
| BP | GO:1901293 | nucleoside phosphate biosynthetic process | IEP | HCCA |
| No external refs found! |
