1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01005233001

GSVIVT01005233001 (XIA, ATXIA)


Aliases : XIA, ATXIA

Description : Myosin-6 OS=Arabidopsis thaliana


Gene families : OG0000203 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01005233001

Target Alias Description ECC score Gene Family Method Actions
AT1G04600 XIA, ATXIA myosin XI A 0.03 OrthoFinder output from all 47 species
AT2G33240 ATXID, XID myosin XI D 0.06 OrthoFinder output from all 47 species
AT5G20450 No alias CONTAINS InterPro DOMAIN/s: Dilute (InterPro:IPR002710);... 0.02 OrthoFinder output from all 47 species
AT5G20470 No alias myosin, putative 0.01 OrthoFinder output from all 47 species
Adi_g055863 XIC, ATXIC class XI myosin microfilament-based motor protein &... 0.01 OrthoFinder output from all 47 species
Adi_g055864 ATXIE, XIE not classified & original description: none 0.01 OrthoFinder output from all 47 species
Als_g17872 ATVIIIA, VIIIA class VIII myosin microfilament-based motor protein &... 0.02 OrthoFinder output from all 47 species
Aob_g14483 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.01 OrthoFinder output from all 47 species
Aop_g07574 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.01 OrthoFinder output from all 47 species
Azfi_s0027.g023600 ATVIIIA, VIIIA not classified & original description: CDS=1-2967 0.03 OrthoFinder output from all 47 species
Azfi_s0725.g083832 ATXIK, XI-17, XIK not classified & original description: CDS=1-1110 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000241.22 ATXIE, XIE Myosin-11 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cpa|evm.model.tig00020614.58 XI-8, XI-B, XIB, ATXIB Myosin-8 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Dac_g04999 ATXIE, XIE not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06227 ATXIK, XI-17, XIK class XI myosin microfilament-based motor protein &... 0.01 OrthoFinder output from all 47 species
Gb_06923 ATM1 Myosin-1 OS=Arabidopsis thaliana (sp|q9lhe9|myo1_arath : 181.0) 0.07 OrthoFinder output from all 47 species
Len_g29954 XI-15, ATXI-I, XI-I class XI myosin microfilament-based motor protein &... 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0074.g017242 ATVIIIA, VIIIA not classified & original description: CDS=216-3518 0.01 OrthoFinder output from all 47 species
Smo230820 ATXIK, XI-17, XIK Cytoskeleton.microfilament network.myosin... 0.02 OrthoFinder output from all 47 species
Zm00001e012626_P001 ATVIIIA, VIIIA,... class VIII myosin microfilament-based motor protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
CC GO:0016459 myosin complex IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR000048 IQ_motif_EF-hand-BS 376 395
IPR000048 IQ_motif_EF-hand-BS 332 347
IPR001609 Myosin_head_motor_dom 16 327
No external refs found!