GSVIVT01005320001

Description : Putative disease resistance RPP13-like protein 1 OS=Arabidopsis thaliana

Gene families : OG0000694 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000694_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: GSVIVT01005320001
Cluster	HCCA: Cluster_77

Target	Alias	Description	ECC score	Gene Family Method
GSVIVT01000642001	No alias	Putative disease resistance RPP13-like protein 1...	0.05	OrthoFinder output from all 47 species
GSVIVT01013533001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01022963001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01027229001	No alias	Putative disease resistance RPP13-like protein 1...	0.04	OrthoFinder output from all 47 species
GSVIVT01032183001	No alias	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species
GSVIVT01032204001	No alias	Putative disease resistance protein RGA4 OS=Solanum bulbocastanum	0.04	OrthoFinder output from all 47 species
LOC_Os12g29160.1	LOC_Os12g29160	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Solyc11g068360.1.1	Solyc11g068360	Putative disease resistance RPP13-like protein 1...	0.03	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043531	ADP binding	IEA	Interproscan
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004222	metalloendopeptidase activity	IEP	HCCA
MF	GO:0008237	metallopeptidase activity	IEP	HCCA
CC	GO:0030312	external encapsulating structure	IEP	HCCA
CC	GO:0031012	extracellular matrix	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR002182	NB-ARC	58	113

External Links

No external refs found!