1. Home
  2. Species
  3. Vitis vinifera
  4. Sequence
  5. GSVIVT01007389001

GSVIVT01007389001


Description : External stimuli response.light.UV-A/blue light.cryptochrome-mediated photoperception.CIB transcriptional regulator


Gene families : OG0000019 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007389001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00008p00265010 HEC2,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00013p00245920 evm_27.TU.AmTr_v1... External stimuli response.light.UV-A/blue... 0.03 OrthoFinder output from all 47 species
AMTR_s00065p00184910 LRL1,... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AMTR_s00164p00062120 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
AT1G10120 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT1G18400 BEE1 BR enhanced expression 1 0.03 OrthoFinder output from all 47 species
AT1G26260 CIB5 cryptochrome-interacting basic-helix-loop-helix 5 0.04 OrthoFinder output from all 47 species
AT1G59640 BPEp, ZCW32, BPE, BPEub BIG PETAL P 0.03 OrthoFinder output from all 47 species
AT5G01305 No alias No description available 0.04 OrthoFinder output from all 47 species
AT5G09750 HEC3 basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.03 OrthoFinder output from all 47 species
AT5G48560 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT5G67110 ALC basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
Adi_g041743 LRL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g056069 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g056779 ATRSL1, RSL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g10642 LRL1 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g14326 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Aev_g17229 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ala_g23180 RSL2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26607 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Als_g01664 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g06024 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Als_g08145 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Als_g18457 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g30603 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g15698 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aop_g21701 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Aop_g29816 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g64342 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene46202.t1 Aspi01Gene46202 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Aspi01Gene49717.t1 LRL3, Aspi01Gene49717 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene60934.t1 PIF3, POC1,... bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0001.g000265 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Azfi_s0075.g037605 LRL3 bHLH-type transcription factor & original description:... 0.05 OrthoFinder output from all 47 species
Azfi_s0083.g038807 HEC1 bHLH-type transcription factor & original description: CDS=1-1287 0.03 OrthoFinder output from all 47 species
Azfi_s0173.g055808 SPT bHLH-type transcription factor & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g15079 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Cba_g15803 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Ceric.28G002800.1 Ceric.28G002800 regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Dac_g03262 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g07111 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Dcu_g06439 CIB1 regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Dcu_g09859 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g25890 RHD6 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g51679 HEC2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g08656 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g08372 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g09150 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g11022 RSL2 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01000717001 UNE12 RNA biosynthesis.transcriptional activation.bHLH... 0.03 OrthoFinder output from all 47 species
GSVIVT01004930001 No alias External stimuli response.light.UV-A/blue... 0.04 OrthoFinder output from all 47 species
Gb_21366 UNE12 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Gb_22201 LRL3 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os01g61480.1 LOC_Os01g61480 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os01g67480.1 LOC_Os01g67480 transcription factor (bHLH) 0.04 OrthoFinder output from all 47 species
LOC_Os02g47660.1 CIB1, LOC_Os02g47660 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
LOC_Os03g10770.1 RSL2, LOC_Os03g10770 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os03g58830.1 LOC_Os03g58830 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
LOC_Os05g04740.2 PIF3, POC1,... transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
LOC_Os05g46370.1 LOC_Os05g46370 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os06g47980.1 LOC_Os06g47980 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
LOC_Os09g28210.1 HEC1, LOC_Os09g28210 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
LOC_Os11g25560.1 LOC_Os11g25560 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Len_g37679 RHD6 LHW/LHL-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g12392 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Lfl_g21331 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Lfl_g37113 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
MA_158850g0010 LRL3 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_83500g0010 HEC1 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_9115341g0010 No alias transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Mp6g21470.1 RSL2 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Msp_g15071 SPT bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g24040 No alias regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Msp_g45118 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g06737 SPT bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25662 CIB1 regulatory protein (CIB) of blue light perception &... 0.03 OrthoFinder output from all 47 species
Ore_g31547 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g10627 LRL3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50236 PIL5, PIF1 regulatory protein *(PIF) of red/far-red light... 0.03 OrthoFinder output from all 47 species
Ppi_g33476 RSL2 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011126 SPT bHLH-type transcription factor & original description: CDS=1-1488 0.03 OrthoFinder output from all 47 species
Sam_g14482 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Smo444782 LRL2 RNA biosynthesis.transcriptional activation.bHLH... 0.02 OrthoFinder output from all 47 species
Smo93546 No alias External stimuli response.light.UV-A/blue... 0.02 OrthoFinder output from all 47 species
Solyc02g070880.1.1 Solyc02g070880 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc02g093280.2.1 SPT, Solyc02g093280 transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Solyc03g113560.4.1 Solyc03g113560 transcription factor (bHLH) 0.05 OrthoFinder output from all 47 species
Solyc04g007300.4.1 BEE3, Solyc04g007300 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc05g006650.3.1 Solyc05g006650 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Solyc06g072520.2.1 Solyc06g072520 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Solyc06g083170.3.1 Solyc06g083170 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Spa_g20083 No alias regulatory protein (CIB) of blue light perception &... 0.02 OrthoFinder output from all 47 species
Spa_g38143 ATRSL1, RSL1 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g40384 No alias regulatory protein (CIB) of blue light perception &... 0.04 OrthoFinder output from all 47 species
Spa_g51940 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g57226 PIF3, POC1, PAP3 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g02037 LRL3 bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g21602 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e011084_P002 Zm00001e011084 transcription factor (bHLH). transcriptional regulator (CIB) 0.02 OrthoFinder output from all 47 species
Zm00001e018857_P002 Zm00001e018857 transcription factor (bHLH). transcriptional regulator (CIB) 0.04 OrthoFinder output from all 47 species
Zm00001e022005_P003 Zm00001e022005 transcription factor (bHLH). transcriptional regulator (CIB) 0.03 OrthoFinder output from all 47 species
Zm00001e027758_P002 Zm00001e027758 transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0004618 phosphoglycerate kinase activity IEP HCCA
BP GO:0006090 pyruvate metabolic process IEP HCCA
BP GO:0006091 generation of precursor metabolites and energy IEP HCCA
BP GO:0006096 glycolytic process IEP HCCA
BP GO:0006163 purine nucleotide metabolic process IEP HCCA
BP GO:0006165 nucleoside diphosphate phosphorylation IEP HCCA
BP GO:0006753 nucleoside phosphate metabolic process IEP HCCA
BP GO:0006757 ATP generation from ADP IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
BP GO:0009117 nucleotide metabolic process IEP HCCA
BP GO:0009132 nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009135 purine nucleoside diphosphate metabolic process IEP HCCA
BP GO:0009141 nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009144 purine nucleoside triphosphate metabolic process IEP HCCA
BP GO:0009150 purine ribonucleotide metabolic process IEP HCCA
BP GO:0009179 purine ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009185 ribonucleoside diphosphate metabolic process IEP HCCA
BP GO:0009199 ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009205 purine ribonucleoside triphosphate metabolic process IEP HCCA
BP GO:0009259 ribonucleotide metabolic process IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
BP GO:0016052 carbohydrate catabolic process IEP HCCA
MF GO:0016774 phosphotransferase activity, carboxyl group as acceptor IEP HCCA
BP GO:0019693 ribose phosphate metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0046031 ADP metabolic process IEP HCCA
BP GO:0046034 ATP metabolic process IEP HCCA
MF GO:0046873 metal ion transmembrane transporter activity IEP HCCA
BP GO:0046939 nucleotide phosphorylation IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0072521 purine-containing compound metabolic process IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 255 303
No external refs found!