Aliases : LOB
Description : RNA biosynthesis.transcriptional activation.AS2/LOB transcription factor
Gene families : OG0000114 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000114_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Target | Alias | Description | ECC score | Gene Family Method | Actions |
|---|---|---|---|---|---|
| AMTR_s00076p00127530 | LBD4,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.05 | OrthoFinder output from all 47 species | |
| AMTR_s00153p00034160 | LBD22,... | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| AT1G07900 | LBD1 | LOB domain-containing protein 1 | 0.04 | OrthoFinder output from all 47 species | |
| AT2G28500 | LBD11 | LOB domain-containing protein 11 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G30340 | LBD13 | LOB domain-containing protein 13 | 0.03 | OrthoFinder output from all 47 species | |
| AT2G40470 | LBD15, ASL11 | LOB domain-containing protein 15 | 0.04 | OrthoFinder output from all 47 species | |
| Adi_g013687 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aev_g16089 | LOB | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Als_g00489 | LOB | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aob_g30115 | LOB | AS2/LOB-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Aspi01Gene43917.t1 | LBD15, ASL11,... | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene43918.t1 | LBD15, ASL11,... | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene64104.t1 | AS2, Aspi01Gene64104 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Aspi01Gene64844.t1 | LOB, Aspi01Gene64844 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Aspi01Gene69867.t1 | LBD15, ASL11,... | AS2/LOB-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Azfi_s0020.g015420 | AS2 | AS2/LOB-type transcription factor & original... | 0.08 | OrthoFinder output from all 47 species | |
| Cba_g24489 | LOB | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Cba_g36506 | LOB | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.01G082500.1 | LOB, Ceric.01G082500 | AS2/LOB-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Ceric.01G082600.1 | AS2, Ceric.01G082600 | AS2/LOB-type transcription factor & original... | 0.04 | OrthoFinder output from all 47 species | |
| Dde_g24713 | LOB | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01003546001 | LBD10 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01004323001 | ASL1, LBD36 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01006269001 | No alias | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.03 | OrthoFinder output from all 47 species | |
| GSVIVT01024662001 | LBD12, ASL5, PCK1 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01027620001 | LBD19 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.05 | OrthoFinder output from all 47 species | |
| GSVIVT01032714001 | LBD15, ASL11 | RNA biosynthesis.transcriptional activation.AS2/LOB... | 0.05 | OrthoFinder output from all 47 species | |
| Gb_21467 | LBD22 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Gb_40684 | LBD11 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os01g07480.2 | LOB, LOC_Os01g07480 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| LOC_Os01g66590.2 | AS2, LOC_Os01g66590 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os02g57490.1 | LBD16, ASL18,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g05500.1 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os03g17810.1 | LBD11, LOC_Os03g17810 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os05g07270.1 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| LOC_Os11g01550.1 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| LOC_Os12g01550.1 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Len_g20443 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.05 | OrthoFinder output from all 47 species | |
| Len_g55694 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| MA_126761g0010 | LBD20 | transcription factor (AS2/LOB) | 0.05 | OrthoFinder output from all 47 species | |
| MA_6918261g0010 | LBD29, ASL16 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| MA_88711g0010 | LBD25 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Msp_g44922 | LBD20 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Ore_g42314 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.06 | OrthoFinder output from all 47 species | |
| Ore_g42913 | LBD27, SCP | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pir_g50933 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g05081 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Pnu_g22342 | LBD27, SCP | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Pnu_g24707 | LBD22 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0108.g020470 | LOB | AS2/LOB-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0120.g021394 | AS2 | AS2/LOB-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Sacu_v1.1_s0186.g025054 | LBD20 | AS2/LOB-type transcription factor & original... | 0.03 | OrthoFinder output from all 47 species | |
| Solyc01g091400.3.1 | LBD19, Solyc01g091400 | transcription factor (AS2/LOB) | 0.1 | OrthoFinder output from all 47 species | |
| Solyc01g091420.2.1 | LBD18, Solyc01g091420 | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc02g067800.4.1 | LBD25, Solyc02g067800 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Solyc03g112430.1.1 | LOB, Solyc03g112430 | transcription factor (AS2/LOB) | 0.08 | OrthoFinder output from all 47 species | |
| Solyc06g007390.4.1 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.06 | OrthoFinder output from all 47 species | |
| Solyc06g050430.3.1 | LBD15, ASL11,... | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Solyc11g045530.3.1 | LBD4, Solyc11g045530 | transcription factor (AS2/LOB) | 0.09 | OrthoFinder output from all 47 species | |
| Solyc11g072470.3.1 | LBD1, Solyc11g072470 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g16209 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g29899 | LOB | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g29900 | LOB | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g30129 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Spa_g40680 | LBD15, ASL11 | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Spa_g49778 | AS2 | AS2/LOB-type transcription factor & original description: none | 0.02 | OrthoFinder output from all 47 species | |
| Tin_g03878 | LOB | AS2/LOB-type transcription factor & original description: none | 0.04 | OrthoFinder output from all 47 species | |
| Tin_g05369 | LBD4 | AS2/LOB-type transcription factor & original description: none | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000390_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e000391_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e001031_P001 | LBD18, Zm00001e001031 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e031510_P001 | LBD12, ASL5,... | transcription factor (AS2/LOB) | 0.04 | OrthoFinder output from all 47 species | |
| Zm00001e038582_P001 | LBD18, Zm00001e038582 | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e042347_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e042443_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e042444_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.02 | OrthoFinder output from all 47 species | |
| Zm00001e042448_P001 | LBD29, ASL16,... | transcription factor (AS2/LOB) | 0.03 | OrthoFinder output from all 47 species | |
| Zm00001e042449_P001 | Zm00001e042449 | no hits & (original description: none) | 0.03 | OrthoFinder output from all 47 species |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No GO annotation available for this sequence |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0003676 | nucleic acid binding | IEP | HCCA |
| MF | GO:0003677 | DNA binding | IEP | HCCA |
| BP | GO:0006351 | DNA-templated transcription | IEP | HCCA |
| BP | GO:0006355 | regulation of DNA-templated transcription | IEP | HCCA |
| BP | GO:0009719 | response to endogenous stimulus | IEP | HCCA |
| BP | GO:0009725 | response to hormone | IEP | HCCA |
| BP | GO:0009889 | regulation of biosynthetic process | IEP | HCCA |
| BP | GO:0010033 | response to organic substance | IEP | HCCA |
| BP | GO:0010468 | regulation of gene expression | IEP | HCCA |
| BP | GO:0010556 | regulation of macromolecule biosynthetic process | IEP | HCCA |
| BP | GO:0019219 | regulation of nucleobase-containing compound metabolic process | IEP | HCCA |
| BP | GO:0019222 | regulation of metabolic process | IEP | HCCA |
| BP | GO:0031323 | regulation of cellular metabolic process | IEP | HCCA |
| BP | GO:0031326 | regulation of cellular biosynthetic process | IEP | HCCA |
| BP | GO:0032774 | RNA biosynthetic process | IEP | HCCA |
| BP | GO:0034654 | nucleobase-containing compound biosynthetic process | IEP | HCCA |
| BP | GO:0042221 | response to chemical | IEP | HCCA |
| MF | GO:0043565 | sequence-specific DNA binding | IEP | HCCA |
| BP | GO:0050789 | regulation of biological process | IEP | HCCA |
| BP | GO:0050794 | regulation of cellular process | IEP | HCCA |
| BP | GO:0051171 | regulation of nitrogen compound metabolic process | IEP | HCCA |
| BP | GO:0051252 | regulation of RNA metabolic process | IEP | HCCA |
| BP | GO:0060255 | regulation of macromolecule metabolic process | IEP | HCCA |
| BP | GO:0065007 | biological regulation | IEP | HCCA |
| BP | GO:0080090 | regulation of primary metabolic process | IEP | HCCA |
| BP | GO:0097659 | nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:1903506 | regulation of nucleic acid-templated transcription | IEP | HCCA |
| BP | GO:2001141 | regulation of RNA biosynthetic process | IEP | HCCA |
| InterPro domains | Description | Start | Stop |
|---|---|---|---|
| IPR004883 | LOB | 10 | 83 |
| No external refs found! |
