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  5. GSVIVT01007689001

GSVIVT01007689001


Description : Cell division cycle protein 48 homolog OS=Glycine max


Gene families : OG0000324 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000324_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007689001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00072p00117380 evm_27.TU.AmTr_v1... Cell division control protein 48 homolog D... 0.03 OrthoFinder output from all 47 species
AT3G56690 CIP111 Cam interacting protein 111 0.04 OrthoFinder output from all 47 species
Adi_g000420 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g080379 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g114666 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g07270 emb1354, CDC48C platform ATPase CDC48 & original description: none 0.04 OrthoFinder output from all 47 species
Ala_g09138 CIP111 not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g20264 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g33031 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02580 CDC48B platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g29183 CIP111 platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g15787 CDC48B platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.16G061700.1 emb1354, CDC48C,... platform ATPase CDC48 & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g09762 emb1354, CDC48C platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08248 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g10601 emb1354, CDC48C platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g09095 CDC48B platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Gb_01408 CIP111 Calmodulin-interacting protein 111 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os06g01980.1 emb1354, CDC48C,... Cell division control protein 48 homolog C... 0.05 OrthoFinder output from all 47 species
Len_g32887 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g39791 No alias platform ATPase CDC48 & original description: none 0.04 OrthoFinder output from all 47 species
MA_10429450g0010 No alias Cell division control protein 48 homolog D... 0.02 OrthoFinder output from all 47 species
MA_26837g0010 CIP111 Calmodulin-interacting protein 111 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp2g12350.1 emb1354, CDC48C Calmodulin-interacting protein 111 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Mp3g20500.1 CDC48B Cell division control protein 48 homolog B... 0.02 OrthoFinder output from all 47 species
Msp_g06020 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g19173 emb1354, CDC48C platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01985 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g55855 CDC48A, CDC48, ATCDC48 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g53020 emb1354, CDC48C not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g12429 No alias platform ATPase CDC48 & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g13901 No alias platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Solyc01g068330.4.1 emb1354, CDC48C,... Cell division control protein 48 homolog C... 0.04 OrthoFinder output from all 47 species
Tin_g15152 emb1354, CDC48C platform ATPase CDC48 & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e000416_P002 Zm00001e000416 platform ATPase (CDC48) 0.03 OrthoFinder output from all 47 species
Zm00001e021405_P001 CIP111, Zm00001e021405 Calmodulin-interacting protein 111 OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e035514_P002 emb1354, CDC48C,... Cell division control protein 48 homolog C... 0.05 OrthoFinder output from all 47 species
Zm00001e036688_P001 emb1354, CDC48C,... Cell division control protein 48 homolog C... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0003924 GTPase activity IEP HCCA
MF GO:0004427 inorganic diphosphate phosphatase activity IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0006810 transport IEP HCCA
BP GO:0006811 monoatomic ion transport IEP HCCA
BP GO:0006812 monoatomic cation transport IEP HCCA
BP GO:0006813 potassium ion transport IEP HCCA
MF GO:0008324 monoatomic cation transmembrane transporter activity IEP HCCA
MF GO:0009678 pyrophosphate hydrolysis-driven proton transmembrane transporter activity IEP HCCA
MF GO:0015075 monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0015078 proton transmembrane transporter activity IEP HCCA
MF GO:0015079 potassium ion transmembrane transporter activity IEP HCCA
MF GO:0015318 inorganic molecular entity transmembrane transporter activity IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
MF GO:0016462 pyrophosphatase activity IEP HCCA
MF GO:0016817 hydrolase activity, acting on acid anhydrides IEP HCCA
MF GO:0016818 hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides IEP HCCA
MF GO:0017111 ribonucleoside triphosphate phosphatase activity IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0022853 active monoatomic ion transmembrane transporter activity IEP HCCA
MF GO:0022890 inorganic cation transmembrane transporter activity IEP HCCA
BP GO:0032259 methylation IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034220 monoatomic ion transmembrane transport IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0071805 potassium ion transmembrane transport IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
BP GO:0098655 monoatomic cation transmembrane transport IEP HCCA
BP GO:0098660 inorganic ion transmembrane transport IEP HCCA
BP GO:0098662 inorganic cation transmembrane transport IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR003959 ATPase_AAA_core 250 379
IPR003959 ATPase_AAA_core 523 656
IPR004201 Cdc48_dom2 137 200
IPR003338 CDC4_N-term_subdom 35 116
No external refs found!