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  5. GSVIVT01007772001

GSVIVT01007772001


Description : RNA biosynthesis.transcriptional activation.bHLH transcription factor


Gene families : OG0002401 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002401_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007772001
Cluster HCCA: Cluster_89

Target Alias Description ECC score Gene Family Method Actions
AT1G10585 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.04 OrthoFinder output from all 47 species
AT1G12540 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
AT1G62975 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.06 OrthoFinder output from all 47 species
AT4G20970 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.05 OrthoFinder output from all 47 species
Aev_g38252 BHLH100 bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g30730 No alias bHLH-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01018460001 No alias RNA biosynthesis.transcriptional activation.bHLH... 0.04 OrthoFinder output from all 47 species
Gb_26737 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
Gb_26741 No alias no hits & (original description: none) 0.06 OrthoFinder output from all 47 species
MA_119324g0010 BHLH101 transcription factor (bHLH). iron/copper homeostasis... 0.03 OrthoFinder output from all 47 species
MA_14544g0010 No alias transcription factor (bHLH) 0.02 OrthoFinder output from all 47 species
MA_239753g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_57970g0010 No alias transcription factor (bHLH) 0.03 OrthoFinder output from all 47 species
MA_8008760g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Pir_g48171 No alias bHLH-type transcription factor & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc03g006910.3.1 Solyc03g006910 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Solyc03g114230.2.1 Solyc03g114230 Transcription factor bHLH162 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Solyc10g008260.2.1 Solyc10g008260 transcription factor (bHLH) 0.07 OrthoFinder output from all 47 species
Solyc12g010585.1.1 Solyc12g010585 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP HCCA
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0004499 N,N-dimethylaniline monooxygenase activity IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0010333 terpene synthase activity IEP HCCA
BP GO:0016226 iron-sulfur cluster assembly IEP HCCA
MF GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen IEP HCCA
MF GO:0016835 carbon-oxygen lyase activity IEP HCCA
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP HCCA
BP GO:0022607 cellular component assembly IEP HCCA
BP GO:0031163 metallo-sulfur cluster assembly IEP HCCA
MF GO:0050660 flavin adenine dinucleotide binding IEP HCCA
MF GO:0050661 NADP binding IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
InterPro domains Description Start Stop
IPR011598 bHLH_dom 15 64
No external refs found!