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  5. GSVIVT01007992001

GSVIVT01007992001 (CDF1)


Aliases : CDF1

Description : RNA biosynthesis.transcriptional activation.C2C2 superfamily.DOF transcription factor


Gene families : OG0000067 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000067_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: GSVIVT01007992001

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00006p00248860 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00080p00087770 TMO6,... RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
AMTR_s00119p00099150 CDF2,... RNA biosynthesis.transcriptional activation.C2C2... 0.04 OrthoFinder output from all 47 species
AMTR_s00160p00046100 evm_27.TU.AmTr_v1... RNA biosynthesis.transcriptional activation.C2C2... 0.02 OrthoFinder output from all 47 species
AT1G26790 No alias Dof-type zinc finger DNA-binding family protein 0.05 OrthoFinder output from all 47 species
AT2G34140 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT3G21270 ADOF2, DOF2 DOF zinc finger protein 2 0.03 OrthoFinder output from all 47 species
AT4G00940 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
AT5G60850 OBP4 OBF binding protein 4 0.05 OrthoFinder output from all 47 species
AT5G62430 CDF1 cycling DOF factor 1 0.06 OrthoFinder output from all 47 species
AT5G66940 No alias Dof-type zinc finger DNA-binding family protein 0.03 OrthoFinder output from all 47 species
Adi_g084666 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g106349 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113667 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g04622 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g04769 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g03761 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g01888 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g11020 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g20563 ADOF1, DOF1 transcription factor *(DOF) & original description: none 0.06 OrthoFinder output from all 47 species
Als_g39186 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g14669 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g18797 OBP3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g67430 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene29615.t1 CDF3, Aspi01Gene29615 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47016.t1 CDF2, Aspi01Gene47016 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008799 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1614 0.04 OrthoFinder output from all 47 species
Azfi_s0008.g011464 No alias not classified & original description: CDS=1-2679 0.04 OrthoFinder output from all 47 species
Azfi_s0166.g054389 TMO6 transcription factor *(DOF) & original description: CDS=1-1341 0.03 OrthoFinder output from all 47 species
Azfi_s1074.g096912 TMO6 transcription factor *(DOF) & original description: CDS=1-1176 0.04 OrthoFinder output from all 47 species
Azfi_s4159.g118156 TMO6 transcription factor *(DOF) & original description: CDS=1-876 0.03 OrthoFinder output from all 47 species
Cba_g06470 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.12G042700.1 TMO6, Ceric.12G042700 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.22G023400.1 OBP3, Ceric.22G023400 transcription factor *(DOF) & original description:... 0.03 OrthoFinder output from all 47 species
Cre12.g521150 CDF2 RNA biosynthesis.transcriptional activation.C2C2... 0.03 OrthoFinder output from all 47 species
Dac_g45363 CDF2 TIFY-type transcription factor & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g19391 CDF2 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g01245 CDF1 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g02493 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g07718 No alias transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ehy_g12722 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g26839 CDF1 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Gb_20144 HCA2, DOF5.6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Gb_20867 CDF3 Cyclic dof factor 3 OS=Arabidopsis thaliana... 0.05 OrthoFinder output from all 47 species
Gb_28499 TMO6 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os01g15900.1 CDF2, LOC_Os01g15900 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os02g15350.1 LOC_Os02g15350 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
LOC_Os02g47810.1 HCA2, DOF5.6,... transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os03g07360.1 CDF3, LOC_Os03g07360 transcription factor (DOF) 0.05 OrthoFinder output from all 47 species
LOC_Os03g16850.1 OBP3, LOC_Os03g16850 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os03g38870.1 LOC_Os03g38870 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os03g60630.1 LOC_Os03g60630 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os04g47990.1 LOC_Os04g47990 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os04g58190.1 LOC_Os04g58190 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
LOC_Os07g13260.1 OBP3, LOC_Os07g13260 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
LOC_Os07g32510.1 TMO6, LOC_Os07g32510 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Len_g15221 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g04824 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g06630 OBP3 transcription factor *(DOF) & original description: none 0.05 OrthoFinder output from all 47 species
Lfl_g16402 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g26281 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
MA_16692g0010 TMO6 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Mp2g20790.1 TMO6 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Msp_g45088 TMO6 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g01077 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g25217 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g32243 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g41458 OBP4 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g01905 DOF2.4, ATDOF2.4 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g16291 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g28297 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g44422 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g48794 CDF3 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g52876 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g19752 OBP4 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g06804 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g16493 CDF3 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0022.g008715 TMO6 transcription factor *(DOF) & original description: CDS=1-1413 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0156.g023637 CDF3 transcription factor *(DOF) & original description: CDS=1-1434 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0279.g027089 ADOF1, DOF1 transcription factor *(DOF) & original description: CDS=1-1056 0.03 OrthoFinder output from all 47 species
Sam_g36281 No alias transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc05g007880.4.1 CDF1, Solyc05g007880 Cyclic dof factor 2 OS=Arabidopsis thaliana... 0.04 OrthoFinder output from all 47 species
Spa_g05594 TMO6 transcription factor *(DOF) & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g41104 CDF3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g08597 OBP3 transcription factor *(DOF) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g23610 TMO6 transcription factor *(DOF) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e000526_P001 CDF3, Zm00001e000526 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e001988_P001 TMO6, Zm00001e001988 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e003414_P001 OBP1, Zm00001e003414 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species
Zm00001e006190_P001 Zm00001e006190 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e007228_P002 Zm00001e007228 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e010454_P001 TMO6, Zm00001e010454 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e011750_P002 Zm00001e011750 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e012824_P001 CDF1, Zm00001e012824 transcription factor (DOF) 0.03 OrthoFinder output from all 47 species
Zm00001e023218_P004 Zm00001e023218 transcription factor (DOF) 0.04 OrthoFinder output from all 47 species
Zm00001e041944_P001 Zm00001e041944 transcription factor (DOF) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA Interproscan
BP GO:0006355 regulation of DNA-templated transcription IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051537 2 iron, 2 sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
BP GO:0055114 obsolete oxidation-reduction process IEP HCCA
InterPro domains Description Start Stop
IPR003851 Znf_Dof 119 175
No external refs found!